<HashMap><database>EGA</database><scores/><additional><omics_type>Genomics</omics_type><dataset_type>N/A</dataset_type><full_dataset_link>https://ega-archive.org/datasets/EGAD00001009827</full_dataset_link><sample_count>8</sample_count><description>EGA dataset EGAD00001009827</description><repository>EGA</repository><title>WGS of off-target analysis of base editing in organoids</title></additional><is_claimable>false</is_claimable><name>6d53bbad-7d44-4020-9b30-584400758e55 - samples</name><description>Seven clonal organoid lines and one bulk wild-type control sample were paired-end whole-genome sequenced using the Illumina Novaseq 6000 system. We sequenced four clonal intestinal organoid lines harbouring engineered TP53 and FBXW7 mutations as well as three lines targeted for oncogenic APC/TP53/PIK3CA/SMAD4 mutations. The reads were mapped to hg38 genome assembly and data is provided as BAM files.</description><dates><updated>2023-01-03 12:22:20</updated></dates><accession>EGAD00001009827</accession><cross_references><TAXONOMY>9606</TAXONOMY><EGA>EGAC00001001864</EGA><EGA>EGAS00001006886</EGA></cross_references></HashMap>