<HashMap><database>EGA</database><scores/><additional><omics_type>Genomics</omics_type><dataset_type>N/A</dataset_type><full_dataset_link>https://ega-archive.org/datasets/EGAD00001011302</full_dataset_link><sample_count>200</sample_count><description>EGA dataset EGAD00001011302</description><repository>EGA</repository><title>Neoantigen Immunogenicity Landscapes and Evolution of Tumor Ecosystems During Immunotherapy with Nivolumab</title></additional><is_claimable>false</is_claimable><name>44710773-ad71-4a97-85ce-73ad293996d6 - samples</name><description>We performed Whole Exome (WXS) and RNASeq sequencing on samples obtained from the same site before and during therapy from our prospective clinical trial (CA209-153, NCT02066636) of nivolumab in advanced Non-small cell lung cancer (NSCLC)  patients that progressed on chemotherapy. There are 58 pre and 42 on therapy WXS samples and 24 pre  and 12 on therapy RNASeq samples. All WXS tumor samples have matching normal samples.</description><dates><updated>2024-07-22 15:14:18</updated></dates><accession>EGAD00001011302</accession><cross_references><TAXONOMY>9606</TAXONOMY><EGA>EGAC00001003387</EGA><EGA>EGAS00001007508</EGA><EGA>EGAS00001007509</EGA></cross_references></HashMap>