{"database":"EGA","file_versions":[],"scores":null,"additional":{"omics_type":["Genomics"],"dataset_type":["N/A"],"full_dataset_link":["https://ega-archive.org/datasets/EGAD00001012120"],"sample_count":["174"],"description":["EGA dataset EGAD00001012120"],"repository":["EGA"],"title":["scRNAseq of aplastic anemia and healthy immune cells co-cultured with autologous HSPCs"],"name_synonyms":["FRAXE, OX19, Ox19, Fmr2, FMR2, FMR2P, Oxh., MRX2, Aff2"],"description_synonyms":["Hypoplastic Anemia, Bru, Raw, Tb11, CG 1618, Feature, Blood, secondary aplastic anemia, Comt, dNSF, NSF1, Gene, Bone Marrow Cell, AA, NSF, Nsf, FBXW4, CG1618, DmNSF, cromo, Marrow, medulla ossea, dNSF1, dNsf1, Yellow, Del(8)44H, Blood Corpuscle, Svc, DmelCG4063., 24Cr, Gene Expressions, aplastic anaemia idiopathic, Aplastic Anaemias, Ebi, EBI, Aplastic anaemia, Expressions, Bone Marrow, Red Marrow, DmelCG4063, Marrow Cell, Clients, sample, Red, DmelCG1618, Tbl1, TBL1, aplastic Anemia, Characteristics, Expression, 10X sequencing, com, Aplastic, Data Set, Aplastic Anaemia, Marrow Cells, aplastic anaemia, Cr, 10x sequencing, SMAP55, antibodies, Client, Cell, Hypoplastic, chrome, Anemia, aplastic anemia idiopathic, Characteristic, medulla ossium, anemia aplastic, Hypoplastic Anemias, Corpuscles, dNSF-1, Data Base, dnsf1, secondary aplastic anaemia, Yellow Marrow, Blood Cell, Anaemia, Col4a-1, CG4063, Chrom, medullary bone, medulla of bone, susceptibility to, anaemia aplastic, Features, E-2f, sample population, E-2g, l(2)k16213, Aplastic Anemia, chromium, Corpuscle, Patient, Cells, Aplastic Anemias, NSF-1, Blood Corpuscles, aplastic anemia, Chromium, Bone"],"additional_accession":[]},"is_claimable":false,"name":"6659b62f-aff2-46cf-af07-de773755cef4 - samples","description":"This dataset contains 8 batches of bone marrow or peripheral blood cells of patients with aplastic anemia and bone marrow cells of healthy controls. The samples from different experimental conditions have been multiplexed with Totalseq-C antibodies (feature barcoding). To demultiplex the samples, see instructions in 10.5281/zenodo.2590196 and https://github.com/janihuuh/aa_manu.\n\nEach sample is analysed with Chromium V(D)J and 5' Gene Expression Platform v2 (10X Genomics). The raw data includes fastq files for Gene expression, feature barcodes and V(D)J Expression. The processed data have been deposited in the ArrayExpress database at EMBL-EBI (www.ebi.ac.uk/arrayexpress).","dates":{"updated":"2024-12-20 12:20:09"},"accession":"EGAD00001012120","cross_references":{"TAXONOMY":["9606"],"EGA":["EGAC00001003457","EGAS00001007604"]}}