{"database":"EGA","file_versions":[],"scores":null,"additional":{"omics_type":["Genomics"],"technology_type":["Illumina Human Core Exome 12v1-1_a"],"study_type":["Other"],"full_dataset_link":["https://ega-archive.org/studies/EGAS00001000924"],"host":["EGA"],"description":["EGA study EGAS00001000924"],"dataset_title":["gaibdc_raw","gaibdc_qc"],"category":["restricted"],"repository":["EGA"],"name_synonyms":["Inflammatory bowel disease, autoimmune bowel disorder, INFLAMM BOWEL DIS, Inflammatory Bowel Diseases, Bowel Diseases, Inflammatory, inflammatory bowel disease., IBD, Inflammatory Bowel Disease"],"description_synonyms":["Genetic Variations, Psychological Power, WGS, whole exome, Bowel Diseases, Variations, Professional Power, low frequency, Diversities, Psychological Powers, Inflammatory Bowel Disease, School-Age, Personal, microarray., Genogroup, School Age, Associations, inflammatory bowel disease, Genetic Diversities, Inflammatory bowel disease, core, Professional, Psychological, School-Age Populations, study, Populations, Diversity, Genetic, IBD, Exomes, INFLAMM BOWEL DIS, whole genome, Genetic Diversity, Population, School Age Populations, Genotypes, Social, Genogroups, Personal Power, Inflammatory Bowel Diseases, Power (Psychology), psychogenic IBS, autoimmune bowel disorder, School-Age Population, Social Power, School Age Population, Inflammatory, Powers, Variation, Power, infrequent"],"additional_accession":[]},"is_claimable":false,"name":"Genotyping of additional Inflammatory Bowel Disease cases   2014","description":"Both internal and external funding has enabled 5000 inflammatory bowel disease cases to be\nwhole genome sequenced (CD @4X, UC @2X). The Anderson and Barrett groups are\ncurrently generating genotypes across these samples for comparison to 4000 population\ncontrols sequenced as part of UK10K. The UK10K project has shown that imputing\nsequenced genetic variation into previously GWASed samples greatly increases power to\ndetect association. Given that our study has been designed to detect association to low\nfrequency variation (0.5% and above) these gains in power are especially important. Overall,\nthe UKIBDGC has GWAS data for around 1800 CD samples (Affy 500K) and 3000 UC\nsamples (Affy6), though some of these samples have also been whole genome sequenced.\nHere, we apply to get all remaining non-GWAS and non-WGS IBD cases in the UKIBDGC\n(N=X) genotyped genotyped on the Illumina Core Exome Array","dates":{"updated":"2018-01-23 05:50:52"},"accession":"EGAS00001000924","cross_references":{"TAXONOMY":["9606"],"EGA":["EGAD00010001158","EGAD00010001157","EGAC00001000205"]}}