{"database":"EGA","file_versions":[],"scores":null,"additional":{"omics_type":["Genomics"],"study_type":["Transcriptome Analysis"],"full_dataset_link":["https://ega-archive.org/studies/EGAS00001003862"],"host":["EGA"],"description":["EGA study EGAS00001003862"],"dataset_title":["Fetal origins of malignant germ cell tumours"],"repository":["EGA"],"category":["restricted"],"name_synonyms":["mantle cell, Transcriptome, determination, Transcriptome Profile, Profile, Expression Profiles, Gene Expression Profile, laser-assisted microdissection., Gene, Profiles, Signatures, Gene Expression, LMD, lymphoma, Expression Signature, Gene Expression Profiles, Expression Signatures, Gene Expression Signatures, chemical analysis, Transcriptomes, Gene Expression Signature, assay, Signature, LCM, Expression Profile, Transcriptome Profiles"],"description_synonyms":["mantle cell, IPP2A2, Ribonucleic, HSN1E, Transcriptome Profile, Neoplasms, Benign Neoplasm, Gene Expression Profile, Gene, Profiles, Tumor, Malignant, PHAPII, 5730420M11Rik, Aim, method, AIM, method used in an experiment, Gene Products, Non Polyadenylated, RNA Gene Products, average, DNMT1, study, SET, DNMT1_HUMAN, Malignancy, TAF-I, Profile, ipp2a2, Tissue, 2pp2a, cDNA Library, Signatures, CG10574, DmelCG4299, Non-Polyadenylated RNA, Neoplasias, API6, IGAAD, set, 2PP2A, DmelCG10574, laser-assisted microdissection, taf-ibeta, Expression Signature, dSET, dSet, Transcriptomes, Malignancies, CXXC finger protein 9, DNA MTase HsaI, Cancer, Tumors, DNA (cytosine-5)-methyltransferase 1, phapii, Dissections, DNA Libraries, RNA, Transcriptome, Malignant Neoplasm, ribose nucleic acid, Expression Profiles, DNMT, igaad, ribonucleic acids, StF-IT-1, RNS, Gene Libraries, MCMT, Libraries, cDNA, group, pooled., Gene Expression, Benign, I-2PP2A, yeast nucleic acid, DNA methyltransferase HsaI, Ribonukleinsaeure, Expression Signatures, Dm I-2, Gene Expression Signatures, I2PP2A, Neoplasm, pentosenucleic acids, Ribonucleic acids, DNA Library, Gene Expression Signature, LCM, Expression Profile, Library, Transcriptome Profiles, CXXC9, ribonucleic acid, Acid, ADCADN, HLA-DR-associated protein II, UNQ203/PRO229, CT-2, ensemble, DI-2, DNA (cytosine-5-)-methyltransferase 1, I-2Dm, Non Polyadenylated RNA, Non-Polyadenylated, Benign Neoplasms, CG4299, Ribonucleic Acid, Cancers, study protocol, cDNA Libraries, CXXC-type zinc finger protein 9, Malignant Neoplasms, I-2PP1, plan specification, LMD, dSET/TAF-Ibeta, 2610030F17Rik, TAF-IBETA, lymphoma, Gene Expression Profiles, TAF-Ibeta, DNA, Signature, AA407739, other neoplasm, i2pp2a, CLEC2C, Neoplasia, m.HsaI"],"additional_accession":[]},"is_claimable":false,"name":"Transcriptome analysis of LCM samples ","description":"We aim to set up a RNA pipeline for LCM samples to study transcriptome landscape of tumor and normal tissues. RNA was extracted from Lazer capture micro-dissection tissues and cDNA libraries were prepared with SMARTseq2 protocol. Libraries are pooled to be sequenced.","dates":{"updated":"2022-05-12 18:17:35"},"accession":"EGAS00001003862","cross_references":{"TAXONOMY":["9606"],"EGA":["EGAD00001007037","EGAC00001000000"]}}