<HashMap><database>EGA</database><scores/><additional><omics_type>Genomics</omics_type><study_type>Whole Genome Sequencing</study_type><full_dataset_link>https://ega-archive.org/studies/EGAS00001005198</full_dataset_link><host>EGA</host><description>EGA study EGAS00001005198</description><dataset_title>sWGS on cfDNA and matching tumor DNA in pediatric cancer</dataset_title><repository>EGA</repository><category>restricted</category><name_synonyms>thymus nucleic acid, Malignant Neoplasm, DNS, malignant neoplasm., Malignancy, (Deoxyribonucleotide)n, Neoplasms, DNAn+1, Benign Neoplasm, Benign Neoplasms, Double Stranded, Deoxyribonucleic acid, Cancers, Double-Stranded, Tumor, Malignant, Deoxyribonucleic acids, Malignant Neoplasms, Neoplasias, (Deoxyribonucleotide)n+m, Benign, Deoxyribonucleic Acid, ds DNA, Neoplasm, Desoxyribonukleinsaeure, Malignancies, Double-Stranded DNA, (Deoxyribonucleotide)m, DNA, deoxyribonucleic acids, DNAn, ds-DNA, other neoplasm, desoxyribose nucleic acid, Neoplasia, Cancer, Tumors</name_synonyms><description_synonyms>com, Malignant Neoplasm, DNS, Data Set, ion, (Deoxyribonucleotide)n, CG 1618, Neoplasms, DNAn+1, Benign Neoplasm, Genome Sequencing, Comt, dNSF, NSF1, Double-Stranded, Tumor, Malignant, Deoxyribonucleic acids, NSF, Nsf, (Deoxyribonucleotide)n+m, CG1618, low depth, Complete Genome, Benign, MT, DmNSF, Deoxyribonucleic Acid, Ionen, Ions, Neoplasm, dNSF1, dNsf1, Analysis, ds-DNA, dNSF-1, desoxyribose nucleic acid, Hydrogen Ions, Hydrogen Ion, dnsf1, thymus nucleic acid, Hydrogen, primary cancer, Complete, Whole Genome, Malignancy, Analyses, iones, Complete Genome Sequencing, Benign Neoplasms, Double Stranded, Deoxyribonucleic acid, Cancers, Proton, ions, malignant tumor, Sequencing, Malignant Neoplasms, Neoplasias, data analysis, data processing, Ion, malignant neoplasm, Data, Whole, ds DNA, Desoxyribonukleinsaeure, DmelCG1618, Malignancies, Double-Stranded DNA, NSF-1, (Deoxyribonucleotide)m, DNA, deoxyribonucleic acids, DNAn, other neoplasm, shallow, Neoplasia, Data Analyses, Cancer, Tumors, Malignant Neoplasms.</description_synonyms></additional><is_claimable>false</is_claimable><name>sWGS on cfDNA and matching tumor DNA in pediatric cancer</name><description>This dataset contains shallow whole genome sequencing data from paired cfDNA - tumor DNA samples of various pediatric cancer entities. Files are provided in fastq format. Samples were sequenced on an Ion Proton sequencer (Thermo Fisher Scientific) or a Hiseq3000 (Illumina). Data analysis is available at https://github.com/rmvpaeme/sWGS_pediatric_cancer.</description><dates><updated>2021-12-01 09:15:41</updated></dates><accession>EGAS00001005198</accession><cross_references><TAXONOMY>9606</TAXONOMY><EGA>EGAD00001007508</EGA><EGA>EGAC00001002060</EGA></cross_references></HashMap>