{"database":"EGA","file_versions":[],"scores":null,"additional":{"omics_type":["Genomics"],"study_type":["RNASeq"],"full_dataset_link":["https://ega-archive.org/studies/EGAS00001007398"],"host":["EGA"],"description":["EGA study EGAS00001007398"],"dataset_title":["Total RNA sequencing data from the Triple Negative Trial (TNT)"],"repository":["EGA"],"category":["restricted"],"name_synonyms":["ANM, STNT, 5-trinitro-, 6-trinitrobenzene, Trotyl, 2-methyl-1, H, total RNA extract, Junk, Smack, 6-TNT, 1-methyl-2, 6-Trinitrotoluene, s-trinitrotoluene, cTnT, Tnt, TNT, NEM5, TNTS, alpha-TNT, Thunder, Trinitrotoluen, Black tar, Tritol, sym-Trinitrotoluol, 6-Trinitrotoluol., Trinitrotoluol, 2, s-Trinitrotoluol, 3, 4, trinitrotoluene, Benzene"],"description_synonyms":["5-trinitro-, CG9490, CG13985, Forestland, Trotyl, MCK10, EDDR1, total RNA extract, Woodland., Smack, 6-TNT, 1-methyl-2, Forested Areas, cTnT, Tnt, TNT, CG13984, alpha-TNT, Trinitrotoluen, Black tar, HGK2, survival, Tritol, RTK6, DmelCG33531, Dmel_CG13984, CAK, Associations, responsivity, sym-Trinitrotoluol, OrR, Forested, Areas, 2, Area, s-Trinitrotoluol, 3, 4, trinitrotoluene, CT33540, ANM, STNT, reactivity, 6-trinitrobenzene, 2-methyl-1, Woodlands, H, death rate, Junk, 6-Trinitrotoluol, 6-Trinitrotoluene, DDR, s-trinitrotoluene, NEM5, free, TNTS, CG33531, Thunder, Forestlands, NTRK4, CG9488, PTK3, time of survival, Trinitrotoluol, Benzene, response, NEP, Forest, PTK3A, CG11573, CD167, TRKE, Forested Area"],"additional_accession":[]},"is_claimable":false,"name":"Total RNA sequencing from the TNT trial (NCT00532727)","description":"Primary tumours from 186 TNT participants (13 matched recurrences) were profiled using total RNA-sequencing. Four transcriptional DDR-related and 25 immune-related signatures were evaluated. We assessed their association with objective-response-rate (ORR) and progression-free-survival (PFS) and performed conditional inference forest clustering to integrate multi-modal data.","dates":{"updated":"2023-07-21 15:11:04"},"accession":"EGAS00001007398","cross_references":{"TAXONOMY":["9606"],"EGA":["EGAD00001011141","EGAC00001003341"]}}