<HashMap><database>EGA</database><scores/><additional><omics_type>Genomics</omics_type><study_type>Cancer Genomics</study_type><full_dataset_link>https://ega-archive.org/studies/EGAS00001007745</full_dataset_link><host>EGA</host><description>EGA study EGAS00001007745</description><dataset_title>Activation of Wnt/ÃŽÂ²-catenin signalling by mutually exclusive FBXW11 and CTNNB1 hotspot mutations drives salivary gland  basal cell adenoma - WES</dataset_title><repository>EGA</repository><category>restricted</category></additional><is_claimable>false</is_claimable><name>DERMATLAS  SG basal cell adenoma and adenocarcinoma WES</name><description>Virtually no other tumour type is associated with so many different forms as skin cancer. Histologically, tumours of the skin may arise from epithelium, including epidermis, hair follicle, sebaceous or sweat gland, melanocytes, dermal-associated mesenchymal structures or tissue resident immune cells, making for a diversity of clinical presentations. Importantly, many skin tumour types have an extremely poor prognosis.  Many skin tumour subtypes have never undergone molecular profiling, or if they have, targeted sequencing has been used and the number of cases analyzed has been so limited that deriving firm conclusions about the profile of driver genes, DNA mutational signatures and germline alleles has not been possible
       For 70 key skin tumour subtypes defined by the World Health Organization, that have not undergone extensive genetic analysis previoulsy, we propose to perform whole exome and transcriptome sequencing, from a range of body sites, to build a genomic atlas of dermatological tumours, including detailed maps of SNVs, copy number alterations, genome-wide methylation and expression profiles.
       The cases in this cohort are SG basal cell adenomas and adenocarcinomas.</description><dates><updated>2024-05-08 15:56:54</updated></dates><accession>EGAS00001007745</accession><cross_references><TAXONOMY>9606</TAXONOMY><EGA>EGAD00001015365</EGA><EGA>EGAC00001000000</EGA></cross_references></HashMap>