EVAapplication/xmlftp://ftp.ebi.ac.uk/pub/databases/eva/PRJEB41335/1172samples_teosinte_maize.vcf.gzftp://ftp.ebi.ac.uk/pub/databases/eva/PRJEB41335/1172samples_teosinte_maize.vcf.gz.tbiftp://ftp.ebi.ac.uk/pub/databases/eva/PRJEB41335/1172samples_teosinte_maize.accessioned.vcf.gzftp://ftp.ebi.ac.uk/pub/databases/eva/PRJEB41335/1172samples_teosinte_maize.accessioned.vcf.gz.tbiprimaryOK2000000Genotyping By ArrayGenomicsNational Maize Improvement Center of ChinaIllumina Genome AnalyzerZea Mayshttps://www.ebi.ac.uk/eva/?eva-study=PRJEB41335EVAZea mays mays, Taming, Dmel_CG6393, DmelCG42257, Zea mays subsp. sacharata, cg11478, Zea mays var. japonica, Zea mays subsp. amylacea, corn, wide/broad, Maize, Genomes, Aspect, Indian corn, Zea mays subsp. ceratina, whole genome, broad, Histories, Historical Aspects, CG30327, historical aspects, Historical Aspect, Dmel_CG30327., Indian Corn, CG11478, wide, Animal Taming, Zea mays var. sacharata, Corn, Teosinte, 65K, historical notes, maize, CG6393, Zea mays subsp. ramosa, Zea mays subsp. everta, CG42257, Zea mays var. mays, Zea mays subsp. tunicata, Zea ramosa, snp, Animal, Aspects, Zea, Indian, Zea mays subsp. indurata, HistoricalNip40-1, Van, VAN, HB-6, DCT1, Zea mays var. japonica, Size, BELLRINGER, H-PAST, FESTA-L, Aspect, acetylglucosaminyltransferase-like protein, FESTA-S, Mexican teosinte, selection process, Zea mays subsp. ceratina, Mbp1, Gene, Traits., ABIN, PNY, Pool, LARGE1, dIKK-gamma, froggy, Gyltl1a, van, School-Age, l(3)04276, teosinte, Gene Pools, teosinte <Zea mays subsp. mexicana>, Pools, DmIKK-gamma, Zea mays subsp. tunicata, AW048865, Sample Sizes, Animal, dmIKKgamma, PAST, CG1977, IKK[[gamma]], myd, IKKg, U19, Virion-associated nuclear shuttling protein, KEY, Key, School-Age Populations, mVAN, BM040, Genetic, BLR, like-acetylglucosaminyltransferase, Maize, PENNYWISE, MDDGB6, Indian corn, Mbp-1, dre1, LARGE, ABIN1, Histories, Population, Structures, Nramp2, Structure, genetic, BPFD#36, Euchlaena <monocots>, IKK, maize, Zea mays subsp. ramosa, Nef, HPAST1, Zea, School Age Population, Zea mays parviglumis, Genetic Structure, constitutitional genetic, Zea mays subsp. indurata, T7H20_80, l(3)dre1, REPLUMLESS, HIV-1 Nef-interacting protein, Taming, ABIN-1, Zea mexicana, Zea mays subsp. amylacea, corn, DMT1, AU018810, gyltl1b-b, T7H20.80, familial, teosinte <Zea mays subsp. huehuetenangensis>, teosinte <Zea mays subsp. parviglumis>, Historical Aspects, historical aspects, Historical Aspect, Balsas teosinte, mk, Indian Corn, IKKgamma, BLH9, DmIKKgamma, LSN, Animal Taming, Zea mays var. sacharata, Euchlaena mexicana, San Antonio Huista teosinte, Zea mays var. huehuetenangensis, hVAN, dIKK, Teosinte, MDDGA6, School Age, mKIAA0609, Zea mays subsp. everta, Kenny, Sizes, BEL1-LIKE HOMEODOMAIN 9, DmelCG32315, KIAA0609, Naf1, NAF1, CG32315, acetylglucosaminyltransferase-like 1A, LARSON, Zea mays mays, fg, A20-binding inhibitor of NF-kappa-B activation 1, Populations, Zea mays subsp. sacharata, VAAMANA, gyltl1b, Dmikkgamma, Dlt, Nef-associated factor 1, mdc1d, IKK-gamma, Euchlaena, PAST1, CG16910, LARGE_HUMAN, School Age Populations, TRAITS, annual teosinte, MDC1D, Sample, DmelCG16910, Corn, like-glycosyltransferase, enr, nip40-1, Festa, historical notes, Zea mays var. mays, Zea ramosa, inherited genetic, School-Age Population, Aspects, l(3)62Ba, Indian, hereditary, Historical, glycosyltransferase-like protein LARGE10falseThe history of maize domestication and adaptation as revealed by a genome-wide survey of SNPDuring the past two decades, researchers have depicted the history of maize domestication and adaptation using genetic information of cultivated maize and its wild relatives (Matsuoka et al., 2002; Wright et al., 2005; van Heerwaarden et al., 2011; Hufford et al., 2012a; Pyhajarvi et al., 2013; Liu et al., 2015), but efforts have been limited either in sample size or range. Here, a large population including 982 maize inbred lines which represent global tropical, subtropical, and temperate germplasm and 190 teosinte accessions from Mexico and Central America were genotyped using Illumina MaizeSNP50 BeadChip to (1) define the Zea genetic structure, (2) estimate the magnitude of introgression from parviglumis and mexicana into the domesticated maize gene pool, (3) identify the loci underwent selection during maize domestication and adaptation, and (4) associate the selected loci with the key domestication and adaptation traits.2020-11-16PRJEB413354577