{"database":"GEO","file_versions":[{"headers":{"Content-Type":["application/json"]},"body":{"files":{"Other":["ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE142nnn/GSE142151/"]},"type":"primary"},"statusCode":"OK","statusCodeValue":200}],"scores":null,"additional":{"omics_type":["Transcriptomics"],"species":["Mus musculus"],"gds_type":[" Genome binding/occupancy profiling by high throughput sequencing","Expression profiling by high throughput sequencing"],"full_dataset_link":["https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE142151"],"repository":["GEO"],"entry_type":["GSE"],"additional_accession":[]},"is_claimable":false,"name":"Chromatin states and transcriptome of CD8+ T cells over the course of differentiation","description":"The goal of this study is to analyze the contribution of transposable elements (TEs) tocis-regulation in CD8+ T cells. Using a combination of NGS techniques we show that specific subfamilies of TEs are enriched, and distributed in a lineage-specific fashion in core and boundary domains of CD8+T cell enhancers.This study represents the first detailed analysis of the topology and the enhancer domain-associated putative functions of distinct TE types.","dates":{"publication":"2020/03/06"},"accession":"GSE142151","cross_references":{"GSM":["GSM4221543","GSM4221532","GSM4221544","GSM4221533","GSM4221541","GSM4221530","GSM4221531","GSM4221542","GSM4221550","GSM4221540","GSM4221529","GSM4221538","GSM4221549","GSM4221528","GSM4221539","GSM4221547","GSM4221536","GSM4221548","GSM4221537","GSM4221545","GSM4221534","GSM4221546","GSM4221535"],"GPL":["17021"],"SRA":["SRP237808"],"GSE":["142151"],"taxon":["Mus musculus"],"PMID":["[32193341]"]}}