<HashMap><database>GEO</database><scores/><additional><omics_type>Transcriptomics</omics_type><species>Homo sapiens</species><gds_type>Expression profiling by high throughput sequencing</gds_type><full_dataset_link>https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE224131</full_dataset_link><repository>GEO</repository><entry_type>GSE</entry_type></additional><is_claimable>false</is_claimable><name>Transcriptional effects of siRNA-mediated MAFB knockdown on SARS-CoV-2-infected human M-CSF and GM-derived macrophages.</name><description>To investigate the MAFB-dependent genes in the SARS-COV-2 infection on human macrophages, we generated M-CSF and GM-CSF-dependent monocyte-derived macrophages in which MAFB has been knocked down by siRNA and then infected with SARS-CoV-2. Monocytes from three independent donors (0.5 x 106 cells/ml, >95% CD14+ cells) were cultured in RPMI 1640 supplemented with 10% fetal bovine serum (FBS) at 37°C in a humidified atmosphere with 5% CO2 for 6 days in the presence of GM-CSF or M-CSF, with cytokine addition every two days. Then, monocyte-derived macrophages were transfected with MAFB-specific siRNA or control siRNA, kept in culture for 6 hours, and then were exposed to SARS-CoV-2 (SARS-CoV-2 clinical isolate Gisaid EPI_ISL_1120962, corresponding to ancestral S D614G, at an MOI=1) or uninfected. After 36 hours, cells were lysed and RNA isolated for transcriptional analysis. We performed gene expression profiling analysis using data obtained from RNA-seq of 3 different donors.</description><dates><publication>2024/02/08</publication></dates><accession>GSE224131</accession><cross_references><GSM>GSM7015632</GSM><GSM>GSM7015643</GSM><GSM>GSM7015642</GSM><GSM>GSM7015631</GSM><GSM>GSM7015641</GSM><GSM>GSM7015630</GSM><GSM>GSM7015640</GSM><GSM>GSM7015625</GSM><GSM>GSM7015636</GSM><GSM>GSM7015635</GSM><GSM>GSM7015624</GSM><GSM>GSM7015623</GSM><GSM>GSM7015645</GSM><GSM>GSM7015634</GSM><GSM>GSM7015644</GSM><GSM>GSM7015622</GSM><GSM>GSM7015633</GSM><GSM>GSM7015629</GSM><GSM>GSM7015628</GSM><GSM>GSM7015639</GSM><GSM>GSM7015638</GSM><GSM>GSM7015627</GSM><GSM>GSM7015637</GSM><GSM>GSM7015626</GSM><GPL>23227</GPL><GSE>224131</GSE><taxon>Homo sapiens</taxon><PMID>[37917179]</PMID></cross_references></HashMap>