<HashMap><database>GEO</database><file_versions><headers><Content-Type>application/xml</Content-Type></headers><body><files><Other>ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE282nnn/GSE282898/</Other></files><type>primary</type></body><statusCode>OK</statusCode><statusCodeValue>200</statusCodeValue></file_versions><scores/><additional><omics_type>Transcriptomics</omics_type><species>Homo sapiens</species><gds_type>Expression profiling by high throughput sequencing</gds_type><full_dataset_link>https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE282898</full_dataset_link><repository>GEO</repository><entry_type>GSE</entry_type></additional><is_claimable>false</is_claimable><name>N4BP1 RNase uses tandem KH domains to associate with EDC4 and mRNA decapping factors in P-bodies</name><description>Processing (P)-bodies are non-membrane cellular structures containing proteins involved in mRNA decay. The enhancer of mRNA decapping protein 4 (EDC4) acts as a scaffold for the formation of the mRNA decapping complex in P-bodies. We show that NEDD4-binding partner-1 (N4BP1) interacts with EDC4 and with the DCP1A and XRN1 proteins involved in the hydrolysis of the mRNA 5′-cap structure in P-bodies. The two tandem KH domains (KHDs), KH-1 and KH-2, present in N4BP1 are essential for its interaction with EDC4. A crystal structure of the tandem KHDs revealed a typical type-I KH topology for both KH domains of N4BP1, and assembly into a globular fold. The N4BP1 KHDs lack the canonical GXXG motif necessary for interaction with single-stranded nucleic acids. The deletion of KH-1, both KHDs, or mutation in the existing non-canonical GXXG motifs in KHDs abolish N4BP1’s interaction with EDC4, indicating that both domains are mandatory for interaction with EDC4.</description><dates><publication>2026/09/18</publication></dates><accession>GSE282898</accession><cross_references><GSM>GSM8652369</GSM><GSM>GSM8652374</GSM><GSM>GSM8652371</GSM><GSM>GSM8652370</GSM><GSM>GSM8652373</GSM><GSM>GSM8652372</GSM><GPL>29480</GPL><GSE>282898</GSE><taxon>Homo sapiens</taxon><PMID>[42754686]</PMID></cross_references></HashMap>