<HashMap><database>GEO</database><file_versions><headers><Content-Type>application/xml</Content-Type></headers><body><files><Other>ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE290nnn/GSE290248/</Other></files><type>primary</type></body><statusCode>OK</statusCode><statusCodeValue>200</statusCodeValue></file_versions><scores/><additional><omics_type>Transcriptomics</omics_type><species>Homo sapiens</species><gds_type>Expression profiling by high throughput sequencing</gds_type><full_dataset_link>https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE290248</full_dataset_link><repository>GEO</repository><entry_type>GSE</entry_type></additional><is_claimable>false</is_claimable><name>Large-scale tethered screen of RNA-binding proteins reveals novel regulators of poly(A) site selection</name><description>Alternative polyadenylation (APA) is a widespread mechanism of gene regulation that generates transcript isoforms with distinct 3' ends. While several RNA-binding proteins (RBPs) are known to regulate APA, the roles of the vast majority of RBPs in this process remain poorly characterized. Using a large scale tethered function assay, we screened a library of 879 human RBPs to identify regulators of APA. We discovered 52 RBPs that modulate APA, validated their functions through knockdown PAS-seq and enhanced crosslinking and immunoprecipitation (eCLIP), and developed a fine-tuned transformer model to predict activators of PAS selection. We focused on two unexpected hits: GRB2, an adaptor protein with crucial roles in cell signaling, and RNPS1, a member of the exon junction complex (EJC). We uncovered mechanisms by which they modulate APA using affinity purification mass spectrometry (AP-MS) and biochemical assays. Our screennprovides a comprehensive resource of RBPs involved in APA and reveals unexpected roles of signaling factors in APA regulation.</description><dates><publication>2026/06/29</publication></dates><accession>GSE290248</accession><cross_references><GSM>GSM8809270</GSM><GSM>GSM8809271</GSM><GSM>GSM8809272</GSM><GSM>GSM8809262</GSM><GSM>GSM8809263</GSM><GSM>GSM8809264</GSM><GSM>GSM8809265</GSM><GSM>GSM8809260</GSM><GSM>GSM8809261</GSM><GSM>GSM8809266</GSM><GSM>GSM8809267</GSM><GSM>GSM8809268</GSM><GSM>GSM8809269</GSM><GSM>GSM8809251</GSM><GSM>GSM8809252</GSM><GSM>GSM8809253</GSM><GSM>GSM8809254</GSM><GSM>GSM8809250</GSM><GSM>GSM8809259</GSM><GSM>GSM8809255</GSM><GSM>GSM8809256</GSM><GSM>GSM8809257</GSM><GSM>GSM8809258</GSM><GSM>GSM8809240</GSM><GSM>GSM8809241</GSM><GSM>GSM8809242</GSM><GSM>GSM8809243</GSM><GSM>GSM8809248</GSM><GSM>GSM8809249</GSM><GSM>GSM8809244</GSM><GSM>GSM8809245</GSM><GSM>GSM8809246</GSM><GSM>GSM8809247</GSM><GSM>GSM8809196</GSM><GSM>GSM8809230</GSM><GSM>GSM8809197</GSM><GSM>GSM8809231</GSM><GSM>GSM8809198</GSM><GSM>GSM8809199</GSM><GSM>GSM8809232</GSM><GSM>GSM8809192</GSM><GSM>GSM8809193</GSM><GSM>GSM8809194</GSM><GSM>GSM8809195</GSM><GSM>GSM8809237</GSM><GSM>GSM8809238</GSM><GSM>GSM8809239</GSM><GSM>GSM8809233</GSM><GSM>GSM8809234</GSM><GSM>GSM8809235</GSM><GSM>GSM8809236</GSM><GSM>GSM8809190</GSM><GSM>GSM8809191</GSM><GSM>GSM8809185</GSM><GSM>GSM8809186</GSM><GSM>GSM8809187</GSM><GSM>GSM8809220</GSM><GSM>GSM8809188</GSM><GSM>GSM8809221</GSM><GSM>GSM8809181</GSM><GSM>GSM8809182</GSM><GSM>GSM8809183</GSM><GSM>GSM8809184</GSM><GSM>GSM8809226</GSM><GSM>GSM8809227</GSM><GSM>GSM8809228</GSM><GSM>GSM8809229</GSM><GSM>GSM8809222</GSM><GSM>GSM8809189</GSM><GSM>GSM8809223</GSM><GSM>GSM8809224</GSM><GSM>GSM8809225</GSM><GSM>GSM8809219</GSM><GSM>GSM8809180</GSM><GSM>GSM8809176</GSM><GSM>GSM8809210</GSM><GSM>GSM8809177</GSM><GSM>GSM8809215</GSM><GSM>GSM8809216</GSM><GSM>GSM8809217</GSM><GSM>GSM8809218</GSM><GSM>GSM8809211</GSM><GSM>GSM8809178</GSM><GSM>GSM8809179</GSM><GSM>GSM8809212</GSM><GSM>GSM8809213</GSM><GSM>GSM8809214</GSM><GSM>GSM8809208</GSM><GSM>GSM8809209</GSM><GSM>GSM8809204</GSM><GSM>GSM8809205</GSM><GSM>GSM8809206</GSM><GSM>GSM8809207</GSM><GSM>GSM8809200</GSM><GSM>GSM8809201</GSM><GSM>GSM8809202</GSM><GSM>GSM8809203</GSM><GPL>24676</GPL><GSE>290248</GSE><taxon>Homo sapiens</taxon><PMID>[42361791]</PMID></cross_references></HashMap>