GEOapplication/xmlftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE302nnn/GSE302248/primaryOK200TranscriptomicsHomo sapiensExpression profiling by high throughput sequencinghttps://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE302248GEOGSEfalseBCAT1 as a critical regulator of human chondrosarcoma progression and differentiation through enzymatic and non-enzymatic mechanismsHuman chondrosarcoma is a malignant bone tumor with a poor prognosis due to its resistance to conventional therapies. In this study, we investigated the role of Branched-Chain Amino Acid Transaminase 1 (BCAT1) in chondrosarcoma pathogenesis. BCAT1 depletion impairs proliferation and tumorigenicity both in vitro and in vivo in a xenograft model, underscoring its oncogenic role. Transcriptome analyses revealed that BCAT1 suppresses the chondrocyte differentiation pathway by inhibiting the expression of SOX9, a master regulator of normal chondrogenesis, through epigenetic regulation. This process depends on BCAT1’s enzymatic activity to generate α-ketoglutarate, which subsequently alters histone methylation status. Additionally, the CXXC motif of BCAT1 scavenges reactive oxygen species (ROS) independently of its enzymatic activity, maintaining G2/M checkpoint signaling and preventing ROS-induced cellular senescence. Finally, knockdown experiments in patient-derived primary cells confirm the clinical significance of BCAT1 function in human chondrosarcoma. These findings establish BCAT1 as a critical moonlighting enzyme in chondrosarcoma proliferation and differentiation, presenting a potential therapeutic target for this challenging cancer.2026/07/10GSE302248GSM9100460GSM9100461GSM9100462GSM9100451GSM9100456GSM9100457GSM9100458GSM9100459GSM9100463GSM9100452GSM9100453GSM9100464GSM9100465GSM9100454GSM9100455GSM91004661857324676302248Homo sapiens