<HashMap><database>GEO</database><file_versions><headers><Content-Type>application/xml</Content-Type></headers><body><files><Other>ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE310nnn/GSE310967/</Other></files><type>primary</type></body><statusCode>OK</statusCode><statusCodeValue>200</statusCodeValue></file_versions><scores/><additional><omics_type>Other</omics_type><species>Saccharomyces cerevisiae</species><gds_type>Other</gds_type><full_dataset_link>https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE310967</full_dataset_link><repository>GEO</repository><entry_type>GSE</entry_type></additional><is_claimable>false</is_claimable><name>Mapping intasome integration sites and nucleosome dyads in chromatinized yeast DNA</name><description>HIV-1 and other lentiviruses hijack the cellular chromatin-binding protein LEDGF/p75 to facilitate integration into active transcription units. However, the mechanism of chromatin engagement by lentiviral intasomes and the structural role of LEDGF/p75 in this process remain poorly understood. To address these gaps, we studied the activities of in vitro-assembled retroviral intasomes in the presence of chromatinized target DNA. While LEDGF/p75 was both essential and minimally sufficient to enhance lentiviral integration into chromatin containing histone H3 trimethylated on Lys36, it unexpectedly facilitated integration outside of the nucleosome core particles. LEDGF/p75 additionally inhibited integration into unmodified chromatin in a dose-dependent manner, promoting integration into naked DNA. The results establish the preference of lentiviral intasomes for linker DNA regions within H3K36Me3-enriched chromatin.</description><dates><publication>2026/07/13</publication></dates><accession>GSE310967</accession><cross_references><GSM>GSM9313417</GSM><GSM>GSM9313416</GSM><GSM>GSM9313419</GSM><GSM>GSM9313418</GSM><GSM>GSM9313413</GSM><GSM>GSM9313412</GSM><GSM>GSM9313415</GSM><GSM>GSM9313414</GSM><GSM>GSM9313431</GSM><GSM>GSM9313430</GSM><GSM>GSM9313433</GSM><GSM>GSM9313411</GSM><GSM>GSM9313432</GSM><GSM>GSM9313410</GSM><GSM>GSM9313409</GSM><GSM>GSM9313406</GSM><GSM>GSM9313428</GSM><GSM>GSM9313427</GSM><GSM>GSM9313405</GSM><GSM>GSM9313408</GSM><GSM>GSM9313429</GSM><GSM>GSM9313407</GSM><GSM>GSM9313424</GSM><GSM>GSM9313423</GSM><GSM>GSM9313426</GSM><GSM>GSM9313404</GSM><GSM>GSM9313403</GSM><GSM>GSM9313425</GSM><GSM>GSM9313420</GSM><GSM>GSM9313422</GSM><GSM>GSM9313421</GSM><GPL>25739</GPL><GPL>36344</GPL><GSE>310967</GSE><taxon>Saccharomyces cerevisiae</taxon></cross_references></HashMap>