<HashMap><database>GEO</database><file_versions><headers><Content-Type>application/xml</Content-Type></headers><body><files><Other>ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE316nnn/GSE316944/</Other></files><type>primary</type></body><statusCodeValue>200</statusCodeValue><statusCode>OK</statusCode></file_versions><scores/><additional><omics_type>Transcriptomics</omics_type><species>Arabidopsis thaliana</species><gds_type>Expression profiling by high throughput sequencing</gds_type><full_dataset_link>https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE316944</full_dataset_link><repository>GEO</repository><entry_type>GSE</entry_type></additional><is_claimable>false</is_claimable><name>Deficiency in plastid EF-Tu elicits DNA damage response in Arabidopsis thaliana</name><description>Arabidopsis RAB8D (AT4G20360) encodes the plastid translation factor EF-Tu, which is crucial for plant viability. We wondered about the connection between RAB8D deficiency and DNA damage response. RNA-seq results revealed significant upregulation of DNA repair-related genes in rab8d-2, a knock-down mutant of RAB8D. Introducing the knockout allele of ATM (atm-2), SOG1 (sog1-1), NAC044 (nac044-1), or NAC085 (nac085-1) into rab8d-2 significantly reduced the expression of DNA repair-related genes.</description><dates><publication>2026/08/04</publication></dates><accession>GSE316944</accession><cross_references><GSM>GSM9462870</GSM><GSM>GSM9462871</GSM><GSM>GSM9462860</GSM><GSM>GSM9462872</GSM><GSM>GSM9462861</GSM><GSM>GSM9462862</GSM><GSM>GSM9462873</GSM><GSM>GSM9462874</GSM><GSM>GSM9462863</GSM><GSM>GSM9462864</GSM><GSM>GSM9462865</GSM><GSM>GSM9462866</GSM><GSM>GSM9462867</GSM><GSM>GSM9462868</GSM><GSM>GSM9462857</GSM><GSM>GSM9462869</GSM><GSM>GSM9462858</GSM><GSM>GSM9462859</GSM><GPL>31102</GPL><GSE>316944</GSE><taxon>Arabidopsis thaliana</taxon></cross_references></HashMap>