{"database":"GEO","file_versions":[{"headers":{"Content-Type":["application/json"]},"body":{"files":{"Other":["ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE317nnn/GSE317877/"]},"type":"primary"},"statusCode":"OK","statusCodeValue":200}],"scores":null,"additional":{"omics_type":["Genomics"],"species":["Homo sapiens"],"gds_type":["Genome binding/occupancy profiling by high throughput sequencing"],"full_dataset_link":["https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE317877"],"repository":["GEO"],"entry_type":["GSE"],"additional_accession":[]},"is_claimable":false,"name":"KAS-CUT&Tag for direct mapping of transcription bubbles","description":"We introduce KAS-CUT&Tag, a method that combines N3-kethoxal labeling of exposed guanines with CUT&Tag to directly map Pol II at transcription bubbles. Pol II-induced bubbles are enriched at many highly-expressed genes, but the highest enrichment is at canonical histone genes in all phases of the cell cycle.","dates":{"publication":"2026/07/21"},"accession":"GSE317877","cross_references":{"GSM":["GSM9913768","GSM9913769","GSM9913775","GSM9913776","GSM9913773","GSM9913774","GSM9913779","GSM9480540","GSM9913777","GSM9913778","GSM9480535","GSM9480534","GSM9480533","GSM9480532","GSM9480499","GSM9913771","GSM9480539","GSM9480538","GSM9913772","GSM9480537","GSM9913770","GSM9480536","GSM9480490","GSM9480494","GSM9913786","GSM9913787","GSM9480493","GSM9913784","GSM9480492","GSM9480491","GSM9913785","GSM9480498","GSM9480531","GSM9480497","GSM9480530","GSM9480496","GSM9913788","GSM9480495","GSM9913789","GSM9480524","GSM9480523","GSM9480489","GSM9480522","GSM9480488","GSM9480521","GSM9480528","GSM9913782","GSM9913783","GSM9480527","GSM9480526","GSM9913780","GSM9913781","GSM9480525","GSM9480529","GSM9480483","GSM9913797","GSM9913798","GSM9480482","GSM9913795","GSM9480481","GSM9913796","GSM9480480","GSM9480520","GSM9480487","GSM9480486","GSM9480485","GSM9480484","GSM9480513","GSM9480512","GSM9913790","GSM9480479","GSM9480478","GSM9480511","GSM9480477","GSM9480510","GSM9913793","GSM9480517","GSM9913794","GSM9480516","GSM9480515","GSM9913791","GSM9913792","GSM9480514","GSM9480519","GSM9480518","GSM9480472","GSM9480471","GSM9480470","GSM9480476","GSM9480475","GSM9480474","GSM9480473","GSM9480469","GSM9480502","GSM9480468","GSM9480501","GSM9480500","GSM9480467","GSM9480466","GSM9480506","GSM10096764","GSM10096765","GSM9480505","GSM10096766","GSM9480504","GSM9480503","GSM9480509","GSM9480508","GSM10096763","GSM9480507","GSM9480461","GSM9480460","GSM9480465","GSM9480464","GSM9480463","GSM9480462","GSM9480458","GSM9480457","GSM9480456","GSM9480455","GSM9480459","GSM9480450","GSM9480454","GSM9480453","GSM9480452","GSM9480451"],"GPL":["34281"],"GSE":["317877"],"taxon":["Homo sapiens"],"PMID":["[42239153]"]}}