GEOapplication/xmlftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE326nnn/GSE326370/primary200OKTranscriptomicsSus scrofaExpression profiling by high throughput sequencinghttps://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE326370GEOGSEfalseSingle-cell short- and long-read transcriptomic atlas of seven reproductive-axis tissues in male Baoshan pigSingle-cell transcriptomic data were generated from seven reproductive-axis tissues of an 18-month-old male Baoshan pig, including hypothalamus, pituitary, prostate, bulbourethral gland, seminal vesicle, epididymis, and testis. To characterize both gene-expression profiles and transcript isoform diversity across these tissues, single-cell short-read libraries were sequenced on an Illumina platform and single-cell long-read libraries were sequenced on an Oxford Nanopore platform. Short-read data were processed with Cell Ranger, whereas long-read data were processed with FLAMES and further assessed for isoform structure. The dataset provides cell-level gene expression matrices, transcript/isoform-level quantification, isoform annotation files, and accompanying cell metadata. These data may facilitate studies of cellular heterogeneity and transcript isoform usage across the porcine reproductive axis.2026/07/04GSE326370GSM9629961GSM9629960GSM9629959GSM9629956GSM9629955GSM9629958GSM9629957GSM9629963GSM9629952GSM9629951GSM9629962GSM9629954GSM9629964GSM96299532929826351326370Sus scrofa