<HashMap><database>GEO</database><file_versions><headers><Content-Type>application/xml</Content-Type></headers><body><files><Other>ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE326nnn/GSE326939/</Other></files><type>primary</type></body><statusCode>OK</statusCode><statusCodeValue>200</statusCodeValue></file_versions><scores/><additional><omics_type>Transcriptomics</omics_type><species>Trichomonas vaginalis</species><gds_type>Expression profiling by high throughput sequencing</gds_type><full_dataset_link>https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE326939</full_dataset_link><repository>GEO</repository><entry_type>GSE</entry_type></additional><is_claimable>false</is_claimable><name>Transcriptomic signatures of Trichomonas vaginalis isolates that exhibit low, intermediate, and high resistance to metronidazole in vitro</name><description>As part of efforts to identify genes associated with Trichomonas vaginalis resistance to 5-nitroimidazole drugs, thirty cryopreserved T. vaginalis isolates were revived and grown using Diamonds TYM medium. Minimum lethal concentrations (MLCs) for metronidazole (MTZ), tinidazole (TDZ), and secnidazole (SEC) were determined using a drug susceptibility assay. Transcriptome profiling was performed for 15 MTZ-sensitive (MTZ-S, MLC &lt; 50µg/mL) and 15 MTZ-resistant (MTZ-R, MLC ≥ 50µg/mL) isolates using next generation RNA-sequencing. Bioinformatics analyses identified differentially expressed genes (DEGs). Among MTZ-R isolates, 6 exhibited MLCs of 50µg/mL, 5 had MLCs between 100-200 µg/mL, and 4 had MLCs ≥ 400 µg/mL. The low-, intermediate-, and high-level MLC resistant isolates were compared to the MTZ-S isolates and transcriptomic profiling identified 154, 425, and 175 DEGs respectively. MTZ-resistant T. vaginalis isolates exhibited altered expression of virulence factor genes compared to sensitive isolates, with variations in gene expression observed across different MLC levels.</description><dates><publication>2026/04/15</publication></dates><accession>GSE326939</accession><cross_references><GSM>GSM9643908</GSM><GSM>GSM9643909</GSM><GSM>GSM9643906</GSM><GSM>GSM9643907</GSM><GSM>GSM9643904</GSM><GSM>GSM9643905</GSM><GSM>GSM9643872</GSM><GSM>GSM9643873</GSM><GSM>GSM9643870</GSM><GSM>GSM9643871</GSM><GSM>GSM9643913</GSM><GSM>GSM9643914</GSM><GSM>GSM9643911</GSM><GSM>GSM9643878</GSM><GSM>GSM9643912</GSM><GSM>GSM9643879</GSM><GSM>GSM9643876</GSM><GSM>GSM9643877</GSM><GSM>GSM9643910</GSM><GSM>GSM9643874</GSM><GSM>GSM9643875</GSM><GSM>GSM9643939</GSM><GSM>GSM9643937</GSM><GSM>GSM9643938</GSM><GSM>GSM9643861</GSM><GSM>GSM9643862</GSM><GSM>GSM9643860</GSM><GSM>GSM9643869</GSM><GSM>GSM9643902</GSM><GSM>GSM9643903</GSM><GSM>GSM9643900</GSM><GSM>GSM9643867</GSM><GSM>GSM9643868</GSM><GSM>GSM9643901</GSM><GSM>GSM9643865</GSM><GSM>GSM9643866</GSM><GSM>GSM9643863</GSM><GSM>GSM9643864</GSM><GSM>GSM9643928</GSM><GSM>GSM9643929</GSM><GSM>GSM9643926</GSM><GSM>GSM9643927</GSM><GSM>GSM9643894</GSM><GSM>GSM9643850</GSM><GSM>GSM9643851</GSM><GSM>GSM9643895</GSM><GSM>GSM9643892</GSM><GSM>GSM9643893</GSM><GSM>GSM9643890</GSM><GSM>GSM9643891</GSM><GSM>GSM9643935</GSM><GSM>GSM9643858</GSM><GSM>GSM9643936</GSM><GSM>GSM9643859</GSM><GSM>GSM9643933</GSM><GSM>GSM9643856</GSM><GSM>GSM9643934</GSM><GSM>GSM9643857</GSM><GSM>GSM9643931</GSM><GSM>GSM9643854</GSM><GSM>GSM9643898</GSM><GSM>GSM9643932</GSM><GSM>GSM9643855</GSM><GSM>GSM9643899</GSM><GSM>GSM9643852</GSM><GSM>GSM9643896</GSM><GSM>GSM9643897</GSM><GSM>GSM9643930</GSM><GSM>GSM9643853</GSM><GSM>GSM9643919</GSM><GSM>GSM9643917</GSM><GSM>GSM9643918</GSM><GSM>GSM9643915</GSM><GSM>GSM9643916</GSM><GSM>GSM9643883</GSM><GSM>GSM9643884</GSM><GSM>GSM9643881</GSM><GSM>GSM9643882</GSM><GSM>GSM9643880</GSM><GSM>GSM9643924</GSM><GSM>GSM9643925</GSM><GSM>GSM9643889</GSM><GSM>GSM9643922</GSM><GSM>GSM9643923</GSM><GSM>GSM9643920</GSM><GSM>GSM9643887</GSM><GSM>GSM9643888</GSM><GSM>GSM9643921</GSM><GSM>GSM9643885</GSM><GSM>GSM9643886</GSM><GPL>36772</GPL><GSE>326939</GSE><taxon>Trichomonas vaginalis</taxon></cross_references></HashMap>