{"database":"GEO","file_versions":[{"headers":{"Content-Type":["application/json"]},"body":{"files":{"Other":["ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE327nnn/GSE327564/"]},"type":"primary"},"statusCode":"OK","statusCodeValue":200}],"scores":null,"additional":{"omics_type":["Transcriptomics"],"species":["Pseudomonas syringae pv. tomato str. DC3000"],"gds_type":["Expression profiling by high throughput sequencing"],"full_dataset_link":["https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE327564"],"repository":["GEO"],"entry_type":["GSE"],"additional_accession":[]},"is_claimable":false,"name":"In planta transcriptome analysis of Pseudomonas syringae pv. tomato DC3000 two component regulator mutant cvsR during early infection and early exposure to pattern-triggered immunity in Arabidopsis thaliana","description":"We extracted P. syringae transcriptome from infected A. thaliana tissue under naive or PTI preactivated tissue by flg22 treatment, through physical separation by low speed centrifugation at 5 hours post inoculation. We compared the transcriptome of wildtype strain and mutant strain of cvsR, a previous identified two component regulator. This study aim to understand bacterial response to PTI and the role of cvsR regulon in plant.","dates":{"publication":"2026/04/14"},"accession":"GSE327564","cross_references":{"GSM":["GSM9661615","GSM9661614","GSM9661617","GSM9661606","GSM9661616","GSM9661605","GSM9661619","GSM9661608","GSM9661607","GSM9661618","GSM9661609","GSM9661620","GSM9661622","GSM9661611","GSM9661610","GSM9661621","GSM9661613","GSM9661612"],"GPL":["34917"],"GSE":["327564"],"taxon":["Pseudomonas syringae pv. tomato str. DC3000"]}}