{"database":"GEO","file_versions":[{"headers":{"Content-Type":["application/json"]},"body":{"files":{"Other":["ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE328nnn/GSE328798/"]},"type":"primary"},"statusCode":"OK","statusCodeValue":200}],"scores":null,"additional":{"omics_type":["Transcriptomics"],"species":["Homo sapiens"],"gds_type":[" Non-coding RNA profiling by array","Expression profiling by array"],"full_dataset_link":["https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE328798"],"repository":["GEO"],"entry_type":["GSE"],"additional_accession":[]},"is_claimable":false,"name":"LPS-induced lncRNA expression profiling in human PBMC-derived macrophages","description":"Introduction: Macrophages play a key role in inflammatory diseases. We aimed to identify long noncoding RNAs that regulate pro-inflammatory activation of human macrophages. Methods: We performed human lncRNA microarray analysis in LPS-stimulated primary human macrophages. We then carried out loss-of-function and gain-of-function experiments, luciferase reporter assays, RNA pulldown, RNA immunoprecipitation, and mouse endotoxemia studies, including humanized mouse models. Results: We identified 11 lncRNAs that were significantly increased by LPS. Among them, lnc-FAM164A1 was selected for further study. Silencing of lnc-FAM164A1 by antisense oligonucleotides or siRNA reduced the LPS-induced expression of pro-inflammatory cytokines, including CCL2, IL-6, and TNF-a. In contrast, enforced expression of lnc FAM164A1 enhanced inflammatory responses in human and mouse macrophages. lnc FAM164A1 also promoted NF-kB-related signaling. RNA pulldown and RNA immunoprecipitation identified ACLY as an lnc-FAM164A1- associated protein. ACLY silencing reduced the inflammatory effects induced by lnc-FAM164A1. Discussion: These findings support that human lnc-FAM164A1 promotes pro-inflammatory activation of macrophages through its interaction with ACLY and NF-kB-related signaling.","dates":{"publication":"2026/04/26"},"accession":"GSE328798","cross_references":{"GSM":["GSM9689891","GSM9689890","GSM9689892","GSM9689886","GSM9689885","GSM9689888","GSM9689887","GSM9689889"],"GPL":["16956"],"GSE":["328798"],"taxon":["Homo sapiens"]}}