<HashMap><database>GEO</database><file_versions><headers><Content-Type>application/xml</Content-Type></headers><body><files><Other>ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE328nnn/GSE328951/</Other></files><type>primary</type></body><statusCode>OK</statusCode><statusCodeValue>200</statusCodeValue></file_versions><scores/><additional><omics_type>Transcriptomics</omics_type><species>Homo sapiens</species><gds_type>Expression profiling by high throughput sequencing</gds_type><full_dataset_link>https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE328951</full_dataset_link><repository>GEO</repository><entry_type>GSE</entry_type></additional><is_claimable>false</is_claimable><name>The embryonic origins of site-specific arthritis; Bulk RNA sequencing of CD34+(Pi16+) fibroblasts stimulated with TNF and IL1b.</name><description>The cellular basis for site-specific inflammation remains unclear. In human fingers, proximal interphalangeal (PIP) joints are preferentially affected by inflammatory arthritis, whereas distal interphalangeal (DIP) joints are spared, providing a model to investigate the predilection of inflammation to distinct sites. We combine single-cell RNA sequencing, imaging and X-ray tomography to examine cellular composition, spatial organization and structure of finger joints during foetal development. PIP joints were enriched for Pi16+ fibroblasts, which are located in perivascular regions and at tendon–ligament interfaces. To investigate whether Pi16+ fibroblasts have a specific response to inflammatory cytokines Pi16+ and Pi16- cells were sorted from foetal fingers using the co-expressed marker CD34. Thes cells were cultured in vitro with and without TNF and IL1b and analyzed using bulk RNA sequencing.</description><dates><publication>2026/04/28</publication></dates><accession>GSE328951</accession><cross_references><GSM>GSM9694809</GSM><GSM>GSM9694817</GSM><GSM>GSM9694806</GSM><GSM>GSM9694816</GSM><GSM>GSM9694805</GSM><GSM>GSM9694808</GSM><GSM>GSM9694807</GSM><GSM>GSM9694813</GSM><GSM>GSM9694802</GSM><GSM>GSM9694812</GSM><GSM>GSM9694801</GSM><GSM>GSM9694815</GSM><GSM>GSM9694804</GSM><GSM>GSM9694814</GSM><GSM>GSM9694803</GSM><GSM>GSM9694798</GSM><GSM>GSM9694797</GSM><GSM>GSM9694800</GSM><GSM>GSM9694811</GSM><GSM>GSM9694799</GSM><GSM>GSM9694810</GSM><GSM>GSM9694794</GSM><GSM>GSM9694796</GSM><GSM>GSM9694795</GSM><GPL>34284</GPL><GSE>328951</GSE><taxon>Homo sapiens</taxon></cross_references></HashMap>