{"database":"GEO","file_versions":[{"headers":{"Content-Type":["application/json"]},"body":{"files":{"Other":["ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE330nnn/GSE330985/"]},"type":"primary"},"statusCode":"OK","statusCodeValue":200}],"scores":null,"additional":{"omics_type":["Transcriptomics"],"species":["Mus musculus"],"gds_type":[" Other","Expression profiling by high throughput sequencing"],"full_dataset_link":["https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE330985"],"repository":["GEO"],"entry_type":["GSE"],"additional_accession":[]},"is_claimable":false,"name":"Positive and Negative Selection of abT cells (OT-I and OT-II) in the thymus 2 - scRNA-seq, CITE-seq and TCRab","description":"This study is part of the immgenT Open Source Project, specifically IGT59, which characterizes activated CD4 and CD8 T cells in the spleen and brain during Toxoplasma gondii infection at 9 dpi (peak infection in the spleen) and 23 dpi (chronic phase with brain cysts). Splenocytes from uninfected controls were also profiled. It includes a spleen control at baseline (6-8-week-old C57BL/6J mouse).","dates":{"publication":"2026/05/19"},"accession":"GSE330985","cross_references":{"GSM":["GSM9736793","GSM9736808","GSM9736809","GSM9736806","GSM9736807","GSM9736804","GSM9736805","GSM9736813","GSM9736802","GSM9736803","GSM9736811","GSM9736800","GSM9736812","GSM9736801","GSM9736798","GSM9736810","GSM9736799","GSM9736796","GSM9736797","GSM9736794","GSM9736795"],"GPL":["24247"],"GSE":["330985"],"taxon":["Mus musculus"]}}