<HashMap><database>GEO</database><file_versions><headers><Content-Type>application/xml</Content-Type></headers><body><files><Other>ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE332nnn/GSE332987/</Other></files><type>primary</type></body><statusCodeValue>200</statusCodeValue><statusCode>OK</statusCode></file_versions><scores/><additional><omics_type>Transcriptomics</omics_type><species>Homo sapiens</species><gds_type>Expression profiling by high throughput sequencing</gds_type><full_dataset_link>https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE332987</full_dataset_link><repository>GEO</repository><entry_type>GSE</entry_type></additional><is_claimable>false</is_claimable><name>Neoadjuvant Pepinemab with Immune Checkpoint Blockade Remodels the Tumor Microenvironment in Metastatic Melanoma</name><description>Neoadjuvant immune checkpoint inhibitors (ICIs) improve event-free survival in metastatic melanoma, yet resistance and recurrence remain common. We evaluated pepinemab, a Semaphorin 4D (SEMA4D)–blocking antibody, in combination with nivolumab and/or ipilimumab in a phase II neoadjuvant biomarker trial for patients with resectable metastatic melanoma. Patients received two neoadjuvant doses followed by curative-intent surgery and one year of adjuvant nivolumab. Pepinemab-containing regimens did not increase immune-related adverse events and did not delay or preclude curative-intent surgical resection. Mechanistically, pepinemab plus ICI was associated with immune remodeling features, including increased T and B cell infiltration and enrichment of type 1 conventional dendritic cells. These changes were associated with the formation of mature lymphoid aggregates resembling tertiary lymphoid structures that contained clonally expanded T cell receptor repertoires, consistent with localized cytotoxic activity. Together, these findings support further evaluation of SEMA4D blockade as a strategy to enhance neoadjuvant immunotherapy in melanoma.</description><dates><publication>2026/08/20</publication></dates><accession>GSE332987</accession><cross_references><GSM>GSM9756709</GSM><GSM>GSM9756736</GSM><GSM>GSM9756714</GSM><GSM>GSM9756715</GSM><GSM>GSM9756712</GSM><GSM>GSM9756734</GSM><GSM>GSM9756735</GSM><GSM>GSM9756713</GSM><GSM>GSM9756718</GSM><GSM>GSM9756719</GSM><GSM>GSM9756716</GSM><GSM>GSM9756717</GSM><GSM>GSM9756732</GSM><GSM>GSM9756710</GSM><GSM>GSM9756733</GSM><GSM>GSM9756711</GSM><GSM>GSM9756730</GSM><GSM>GSM9756731</GSM><GSM>GSM9756703</GSM><GSM>GSM9756725</GSM><GSM>GSM9756726</GSM><GSM>GSM9756704</GSM><GSM>GSM9756723</GSM><GSM>GSM9756701</GSM><GSM>GSM9756724</GSM><GSM>GSM9756702</GSM><GSM>GSM9756729</GSM><GSM>GSM9756707</GSM><GSM>GSM9756708</GSM><GSM>GSM9756727</GSM><GSM>GSM9756705</GSM><GSM>GSM9756706</GSM><GSM>GSM9756728</GSM><GSM>GSM9756721</GSM><GSM>GSM9756700</GSM><GSM>GSM9756722</GSM><GSM>GSM9756720</GSM><GPL>24676</GPL><GSE>332987</GSE><taxon>Homo sapiens</taxon></cross_references></HashMap>