GEOapplication/xmlftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE333nnn/GSE333988/primaryOK200TranscriptomicsHomo sapiensExpression profiling by high throughput sequencinghttps://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE333988GEOGSEfalseTranscriptomic analysis of GKB202-treated circulating tumor cells isolated from patients with lung cancer and pancreatic cancerCirculating tumor cells (CTCs) are associated with metastatic dissemination and adaptive stress responses in cancer. In this study, patient-derived CTCs isolated from lung cancer and pancreatic cancer samples were treated with GKB202, a natural compound derived from Antrodia cinnamomea, to investigate treatment-associated transcriptomic changes. Bulk RNA sequencing was performed to compare untreated/control and GKB202-treated CTC samples. This dataset provides raw sequencing reads and processed gene-level expression matrices for evaluating the effects of GKB202 on CTC-related transcriptional programs, including stress-response and cancer-associated pathways.2026/06/04GSE333988GSM9778524GSM9778523GSM9778522GSM9778521GSM9778530GSM9778529GSM9778528GSM9778527GSM9778526GSM977852518573333988Homo sapiens