{"database":"GEO","file_versions":[{"headers":{"Content-Type":["application/json"]},"body":{"files":{"Other":["ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE334nnn/GSE334564/"]},"type":"primary"},"statusCodeValue":200,"statusCode":"OK"}],"scores":null,"additional":{"omics_type":["Transcriptomics"],"species":["Homo sapiens"],"gds_type":["Expression profiling by high throughput sequencing"],"full_dataset_link":["https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE334564"],"repository":["GEO"],"entry_type":["GSE"],"additional_accession":[]},"is_claimable":false,"name":"ArchetypeShift: An R Package Integrating KEGG-Informed Pathway Analysis and IPA-Derived Functional Predictions for Validation of Single-Cell Archetypes","description":"Archetype analysis is important because clustering of cell types is often nuanced and inexact. We developed a new pipeline to identify and annotate single-cell archetypes from preterm infant small intenstine organoids.","dates":{"publication":"2026/06/30"},"accession":"GSE334564","cross_references":{"GSM":["GSM9790996","GSM9790997","GSM9790998","GSM9790999","GSM9790994","GSM9790995"],"GPL":["30173"],"GSE":["334564"],"taxon":["Homo sapiens"],"PMID":["[42591774]"]}}