GEOapplication/xmlftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE335nnn/GSE335065/primaryOK200TranscriptomicsRhodotorula toruloides Synechococcus elongatus PCC 7942 = FACHB-805Expression profiling by high throughput sequencinghttps://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE335065GEOGSEfalseGene Expression Profiling of Synechococcus elongatus PCC 7942 and Rhodotorula toruloides NBRC 0880 (Rhodosporidium toruloides IFO0880) in Co-culture and Membrane-Separated Bioreactor Configurations Under Various Stress and Nutrient ConditionsThis RNA-seq study examines transcriptional responses of a cyanobacterium–yeast co-culture system comprising Synechococcus elongatus PCC 7942 and Rhodotorula toruloides NBRC 0880 (Rhodosporidium toruloides IFO0880) under multiple conditions. Experiments included planktonic co-cultures in 50 mL tubes subjected to chemical stressors (oxidative stress, photosynthesis inhibition), temperature stress, nutrient limitation (nitrogen, phosphorus), pH extremes, and heterotrophic conditions, as well as physically separated co-cultures in a 600 mL membrane bioreactor. Axenic controls for Synechococcus elongatus PCC 7942 were included for comparison. Differential gene expression analysis provides insight into interspecies interactions and individual organism responses across co-culture configurations.2026/06/11GSE335065GSM9805324GSM9805325GSM9805326GSM9805327GSM9805328GSM9805329GSM9805360GSM9805283GSM9805284GSM9805361GSM9805285GSM9805362GSM9805286GSM9805363GSM9805364GSM9805287GSM9805320GSM9805288GSM9805321GSM9805365GSM9805289GSM9805366GSM9805322GSM9805323GSM9805280GSM9805281GSM9805282GSM9805335GSM9805336GSM9805337GSM9805338GSM9805339GSM9805294GSM9805295GSM9805296GSM9805297GSM9805330GSM9805331GSM9805298GSM9805332GSM9805299GSM9805333GSM9805334GSM9805290GSM9805291GSM9805292GSM9805293GSM9805346GSM9805302GSM9805303GSM9805347GSM9805348GSM9805304GSM9805305GSM9805349GSM9805306GSM9805307GSM9805308GSM9805309GSM9805340GSM9805341GSM9805342GSM9805343GSM9805300GSM9805344GSM9805345GSM9805301GSM9805357GSM9805313GSM9805314GSM9805358GSM9805315GSM9805359GSM9805316GSM9805317GSM9805318GSM9805319GSM9805350GSM9805351GSM9805352GSM9805276GSM9805353GSM9805354GSM9805277GSM9805310GSM9805311GSM9805355GSM9805278GSM9805312GSM9805279GSM98053563710437105335065Rhodotorula toruloides Synechococcus elongatus PCC 7942 = FACHB-805