<HashMap><database>GEO</database><file_versions><headers><Content-Type>application/xml</Content-Type></headers><body><files><Other>ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE336nnn/GSE336443/</Other></files><type>primary</type></body><statusCodeValue>200</statusCodeValue><statusCode>OK</statusCode></file_versions><scores/><additional><omics_type>Transcriptomics</omics_type><species>Homo sapiens</species><gds_type>Expression profiling by high throughput sequencing</gds_type><full_dataset_link>https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE336443</full_dataset_link><repository>GEO</repository><entry_type>GSE</entry_type></additional><is_claimable>false</is_claimable><name>Restricted MHCII trafficking in Mycobacterium tuberculosis-infected M2-like macrophages limits CD4+ T cell activation</name><description>Recognition of infected macrophages by CD4+ T cells is essential to immune protection against Mycobacterium tuberculosis (Mtb), the causative agent of tuberculosis (TB). However, not all infected macrophage subsets successfully elicit T cell activation. We recently discovered that M2-like macrophages fail to efficiently activate memory CD4+ T cells when infected with Mtb, yet successfully elicit T cell activation when loaded with peptides, g-irradiated bacteria, or Mtb whole cell lysate. Since the mechanisms underlying CD4+ T-cell evasion by infected M2 but not M1-like macrophages remain underexplored, we sought to determine the genes and pathways unique to Mtb infection of M2-like cells, including alveolar macrophages. RNA sequencing of macrophage subsets infected with virulent Mtb identified enrichment of IL-10 and type I IFN signaling pathway genes, including IL10RA and HERC5, respectively, in infected M2-like and human alveolar macrophages. However, genes involved in MHC II trafficking, such as AP1M2, were higher in infected M1-like macrophages. In complementary experiments using fluorescent microscopy and flow cytometry, we observed impaired trafficking of newly synthesized MHC II to the plasma membrane of Mtb-infected M2-like macrophages despite high total surface MHC II levels. Neutralization of IL-10 or knockdown of HERC5 restored MHC II trafficking to the cell surface among infected M2-like macrophages and significantly enhanced activation of memory CD4+ T cells in an MHC II-dependent manner. These findings identify coordinated IL-10 and type I IFN signaling as key mechanisms that restrict MHC II trafficking to the plasma membrane in Mtb-infected M2-like macrophages, thereby limiting antigen presentation and CD4+ T cell activation. We propose that host-directed therapies targeting these pathways in infected alveolar macrophages will facilitate T cell recognition for the prevention or treatment of active TB.</description><dates><publication>2026/09/25</publication></dates><accession>GSE336443</accession><cross_references><GSM>GSM9835381</GSM><GSM>GSM9835341</GSM><GSM>GSM9835342</GSM><GSM>GSM9835386</GSM><GSM>GSM9835383</GSM><GSM>GSM9835384</GSM><GSM>GSM9835422</GSM><GSM>GSM9835387</GSM><GSM>GSM9835420</GSM><GSM>GSM9835344</GSM><GSM>GSM9835349</GSM><GSM>GSM9835426</GSM><GSM>GSM9835425</GSM><GSM>GSM9835347</GSM><GSM>GSM9835429</GSM><GSM>GSM9835428</GSM><GSM>GSM9835393</GSM><GSM>GSM9835390</GSM><GSM>GSM9835391</GSM><GSM>GSM9835397</GSM><GSM>GSM9835353</GSM><GSM>GSM9835351</GSM><GSM>GSM9835395</GSM><GSM>GSM9835356</GSM><GSM>GSM9835433</GSM><GSM>GSM9835354</GSM><GSM>GSM9835432</GSM><GSM>GSM9835431</GSM><GSM>GSM9835399</GSM><GSM>GSM9835437</GSM><GSM>GSM9835435</GSM><GSM>GSM9835360</GSM><GSM>GSM9835440</GSM><GSM>GSM9835362</GSM><GSM>GSM9835400</GSM><GSM>GSM9835367</GSM><GSM>GSM9835322</GSM><GSM>GSM9835366</GSM><GSM>GSM9835327</GSM><GSM>GSM9835325</GSM><GSM>GSM9835402</GSM><GSM>GSM9835369</GSM><GSM>GSM9835409</GSM><GSM>GSM9835406</GSM><GSM>GSM9835329</GSM><GSM>GSM9835371</GSM><GSM>GSM9835331</GSM><GSM>GSM9835373</GSM><GSM>GSM9835334</GSM><GSM>GSM9835378</GSM><GSM>GSM9835379</GSM><GSM>GSM9835412</GSM><GSM>GSM9835376</GSM><GSM>GSM9835410</GSM><GSM>GSM9835339</GSM><GSM>GSM9835416</GSM><GSM>GSM9835336</GSM><GSM>GSM9835413</GSM><GPL>24676</GPL><GSE>336443</GSE><taxon>Homo sapiens</taxon><PMID>[42465483]</PMID></cross_references></HashMap>