{"database":"GEO","file_versions":[{"headers":{"Content-Type":["application/json"]},"body":{"files":{"Other":["ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE338nnn/GSE338709/"]},"type":"primary"},"statusCode":"OK","statusCodeValue":200}],"scores":null,"additional":{"omics_type":["Methylation profiling"],"species":["Alicyclobacillus acidocaldarius subsp. acidocaldarius"],"gds_type":["Methylation profiling by high throughput sequencing"],"full_dataset_link":["https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE338709"],"repository":["GEO"],"entry_type":["GSE"],"additional_accession":[]},"is_claimable":false,"name":"Genome-wide DNA methylation motifs of Alicyclobacillus acidocaldarius subsp. acidocaldarius strain KCTC 1825 determined by PacBio HiFi sequencing","description":"PacBio HiFi sequencing was used to characterize genome-wide DNA base modifications and methylation motifs in Alicyclobacillus acidocaldarius subsp. acidocaldarius strain KCTC 1825 (DSM 446). Base-modification kinetics were mapped to the complete genome assembly and analyzed for m6A and m4C signals. The processed dataset provides per-base modification calls, motif-associated calls, and motif summaries linked to the public genome assembly and SRA run.","dates":{"publication":"2026/07/20"},"accession":"GSE338709","cross_references":{"GSM":["GSM9880481"],"GPL":["37223"],"GSE":["338709"],"taxon":["Alicyclobacillus acidocaldarius subsp. acidocaldarius"]}}