GEOapplication/xmlftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE343nnn/GSE343573/primaryOK200TranscriptomicsAcanthamoeba castellaniiExpression profiling by high throughput sequencinghttps://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE343573GEOGSEfalseLong-read MAS-ISO-seq profiling of Acanthamoeba castellanii strain Neff encystation timecourse.The amoebozoan Acanthamoeba castellanii is an important cause of infectious blindness and a key evolutionary outgroup to humans and fungi. We conducted complementary proteomic and transcriptomic profiling of an Acanthamoeba encystation timecourse. For the transcriptomics, we used both short read RNA-seq (Illumina) and long-read MAS-ISO-seq (PacBio). The long-read MAS-ISO-seq data are reported here.2026/08/19GSE343573GSM9957557GSM9957558GSM9957548GSM9957559GSM9957549GSM9957553GSM9957554GSM9957555GSM9957556GSM9957550GSM9957551GSM995755237363343573Acanthamoeba castellanii