{"database":"GEO","file_versions":[{"headers":{"Content-Type":["application/json"]},"body":{"files":{"Other":["ftp://ftp.ncbi.nlm.nih.gov/geo/series/GSE343nnn/GSE343664/"]},"type":"primary"},"statusCode":"OK","statusCodeValue":200}],"scores":null,"additional":{"omics_type":["Transcriptomics"],"species":["Toona sinensis"],"gds_type":["Expression profiling by high throughput sequencing"],"full_dataset_link":["https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE343664"],"repository":["GEO"],"entry_type":["GSE"],"additional_accession":[]},"is_claimable":false,"name":"Comparative transcriptome dynamics between the dormant and actively growing buds of Toona sinensis ‘Shuyahong’","description":"Understanding the regulation of bud dormancy–activity transition is critical for annual bud production and high-quality cultivation of Toona sinensis. Here, we report a comparative transcriptomic analysis of dormant and actively growing buds. Transcriptome profiling identified 3,779 differentially expressed genes (DEGs), which were significantly enriched in key pathways such as ribosome, photosynthesis-antenna proteins, plant hormone signal transduction, and MAPK signaling pathway. Additionally, 327 DEGs were classified as transcription factors (TFs) belonging to 48 families, including NAC, AP2/ERF, MYB-related, bZIP, and WRKY. Our data provide a molecular framework for understanding the integrated regulatory network involving phytohormone signaling, ribosome biogenesis, photosynthetic activity, and transcription factor cascades that governs bud dormancy–activity transition in Toona sinensis.","dates":{"publication":"2026/08/21"},"accession":"GSE343664","cross_references":{"GSM":["GSM9959439","GSM9959438","GSM9959435","GSM9959434","GSM9959437","GSM9959436"],"GPL":["37367"],"GSE":["343664"],"taxon":["Toona sinensis"]}}