{"database":"GPMDB","file_versions":[],"scores":{"citationCount":0,"reanalysisCount":0,"viewCount":11,"searchCount":3},"additional":{"omics_type":["Other"],"submitter":["Baerenfaller K, et al."],"instrument_platform":["Instrument"],"disease":["Not Available"],"brenda_tissue":["Not available"],"species":["Thale_cress"],"submitter_mail":["kbaerenfaller@ethz.ch"],"publication":["22929616"],"model":["http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM11210004331","http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM11210004342","http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM11210004320","http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM11210004332","http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM11210004343","http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM11210004321","http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM11210004340","http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM11210004330","http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM11210004341","http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM11210004324","http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM11210004335","http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM11210004325","http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM11210004333","http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM11210004322","http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM11210004323","http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM11210004334","http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM11210004339","http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM11210004328","http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM11210004329","http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM11210004326","http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM11210004337","http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM11210004338","http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM11210004327"],"submitter_affiliation":["Department of Biology, ETH Zurich, CH-8092 Zurich, Switzerland"],"cell_type":["Not available"],"repository":["GPMDB"],"pubmed_abstract":["Leaves have a central role in plant energy capture and carbon conversion and therefore must continuously adapt their development to prevailing environmental conditions. To reveal the dynamic systems behaviour of leaf development, we profiled Arabidopsis leaf number six in depth at four different growth stages, at both the end-of-day and end-of-night, in plants growing in two controlled experimental conditions: short-day conditions with optimal soil water content and constant reduced soil water conditions. We found that the lower soil water potential led to reduced, but prolonged, growth and an adaptation at the molecular level without a drought stress response. Clustering of the protein and transcript data using a decision tree revealed different patterns in abundance changes across the growth stages and between end-of-day and end-of-night that are linked to specific biological functions. Correlations between protein and transcript levels depend on the time-of-day and also on protein localisation and function. Surprisingly, only very few of >1700 quantified proteins showed diurnal abundance fluctuations, despite strong fluctuations at the transcript level."],"pubmed_title":["Systems-based analysis of Arabidopsis leaf growth reveals adaptation to water deficit."],"pubmed_authors":["Baerenfaller Katja K,Massonnet Catherine C,Walsh Sean S,Baginsky Sacha S,Bühlmann Peter P,Hennig Lars L,Hirsch-Hoffmann Matthias M,Howell Katharine A KA,Kahlau Sabine S,Radziejwoski Amandine A,Russenberger Doris D,Rutishauser Dorothea D,Small Ian I,Stekhoven Daniel D,Sulpice Ronan R,Svozil Julia J,Wuyts Nathalie N,Stitt Mark M,Hilson Pierre P,Granier Christine C,Gruissem Wilhelm W,","Baerenfaller Katja K, Massonnet Catherine C, Walsh Sean S, Baginsky Sacha S, Bühlmann Peter P, Hennig Lars L, Hirsch-Hoffmann Matthias M, Howell Katharine A KA, Kahlau Sabine S, Radziejwoski Amandine A, Russenberger Doris D, Rutishauser Dorothea D, Small Ian I, Stekhoven Daniel D, Sulpice Ronan R, Svozil Julia J, Wuyts Nathalie N, Stitt Mark M, Hilson Pierre P, Granier Christine C, Gruissem Wilhelm W"],"name_synonyms":["[H]O[H], determination, growth pattern, Cresses, A., non-developmental growth, Arabidopsis thaliana, Mouse-ear Cress, aqua, hydrogen hydroxide, thaliana, InChI=1/H2O/h1H2, BOUND WATER, A. thaliana, eau, Mouse-ear Cresses, oxidane, hoja (Spanish, 葉 (Japanese, Mouse-ear, InChIKey=XLYOFNOQVPJJNP-UHFFFAOYAF, acqua, Cardaminopsis, HOH, H2O, Arabidopsis, Arabidopsis thalianas, exact), A. thalianas, chemical analysis, thalianas, dihydridooxygen, Cress, assay, Wasser, Mouse ear, dihydrogen oxide, [OH2], Arabidopses, agua., Hydrogen Oxide"],"description_synonyms":["WD1, RTA1A, experimental, mol, Processes, A., l11Jus51, number, BOUND WATER, oxidane, presence, Drought, InChIKey=XLYOFNOQVPJJNP-UHFFFAOYAF, Cardaminopsis, agua, HOH, Arabidopsis thalianas, exact), EMPB3, reduced, subnumerary, A. thalianas, Peat, thalianas, tiny, CD105, present in fewer numbers in organism, EPB3, reactivity, Empb3, methods, 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Data published as part of Mol Syst Biol. 2012, 8:606  . From the Abstract: {{i}} ... To reveal the dynamic systems behaviour of leaf development, we profiled Arabidopsis leaf number six in depth at four different growth stages, at both the end-of-day and end-of-night, in plants growing in two controlled experimental conditions: short-day conditions with optimal soil water content and constant reduced soil water conditions. We found that the lower soil water potential led to reduced, but prolonged, growth and an adaptation at the molecular level without a drought stress response ...{{/i}}","dates":{"submission":"2012-08-30"},"accession":"GPM11210004321","cross_references":{"pubmed":["22929616"],"pride":[]}}