GPMDB00345OtherYang CR, et al.InstrumentNot AvailableNot availableMus_musculus_viruses, 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g/~/dblist_gpmnum/gpmnum=GPM32320018913http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018914http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018911http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018912http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018917http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018918http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018915http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018916http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018910http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018924http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018925http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018922http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018923http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018928http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018929http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018926http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018927http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018920http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018921http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018935http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018936http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018933http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018934http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018939http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018937http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018938http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018931http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018932http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018930http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320019001http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320019000http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018946http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018947http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018944http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018945http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018948http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018949http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018942http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018943http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018940http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018941http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320019012http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320019011http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320019010http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018957http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018958http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018955http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018956http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018959http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320019005http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320019004http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018950http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320019003http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320019002http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018953http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320019009http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320019008http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018954http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018951http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320019007http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018952http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320019006http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320019023http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320019022http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320019021http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320019020http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018968http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018847http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018848http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018969http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018845http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018966http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018846http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018967http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018849http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018960http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320019016http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018840http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018961http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320019015http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320019014http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320019013http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018843http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018964http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320019019http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018844http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018965http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018841http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018962http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320019018http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018963http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320019017http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018842NHLBI, National Institutes of HealthNot availableGPMDBVasopressin controls osmotic water transport in the renal collecting duct through regulation of aquaporin-2 (AQP2). We carried out bioinformatic analysis of quantitative proteomic data from the accompanying article to investigate the mechanisms involved. The experiments used stable isotope labeling by amino acids in cell culture in cultured mpkCCD cells to quantify each protein species in each of five differential-centrifugation (DC) fractions with or without the vasopressin analog 1-desamino-8-d-arginine-vasopressin (dDAVP). The mass spectrometry data and parallel Western blot experiments confirmed that dDAVP addition is associated with an increase in AQP2 abundance in the 17,000-g pellet and a corresponding decrease in the 200,000-g pellet. Remarkably, all subunits of the cytoplasmic ribosome also increased in the 17,000-g pellet in response to dDAVP (P < 10(-34)), with a concomitant decrease in the 200,000-g pellet. Eukaryotic translation initiation complex 3 (eIF3) subunits underwent parallel changes (P < 10(-6)). These findings are consistent with translocation of assembled ribosomes and eIF3 complexes into the rough endoplasmic reticulum in response to dDAVP. Conversely, there was a systematic decrease in small GTPase abundances in the 17,000-g fraction. In contrast, most proteins, including protein kinases, showed no systematic redistribution among DC fractions. Of the 521 protein kinases coded by the mouse genome, 246 were identified, but many fewer were found to colocalize with AQP2 among DC fractions. Bayes' rule was used to integrate the new colocalization data with prior data to identify protein kinases most likely to phosphorylate aquaporin-2 at Ser(256) (Camk2b > Camk2d > Prkaca) and Ser(261) (Mapk1 = Mapk3 > Mapk14).Deep proteomic profiling of vasopressin-sensitive collecting duct cells. II. Bioinformatic analysis of vasopressin signaling.Yang Chin-Rang CR,Raghuram Viswanathan V,Emamian Milad M,Sandoval Pablo C PC,Knepper Mark A MA,Yang Chin-Rang CR, Raghuram Viswanathan V, Emamian Milad M, Sandoval Pablo C PC, Knepper Mark A MAjunctional tube, tubulus renalis colligens, deep, tubulus renalis arcuatus, arcuate renal tubule, kidney collecting duct, collecting tubule, renal collecting tubule, sensitive, collecting duct system, kidney collecting tubule, Cell., collecting duct, ureteric treeCell., data, cell, Celljunctional tube, tubulus renalis colligens, deep, tubulus renalis arcuatus, arcuate renal tubule, kidney collecting duct, collecting tubule, biological signaling, signalling process, renal collecting tubule, determination, sensitive, signaling process, chemical analysis, collecting duct system, kidney collecting tubule, collecting duct, assay, ureteric tree, Cell, single organism signaling., signallingCsma, extracellular signal-regulated kinase activity, GrpL, GRPL, pp44mapk, Growth factor receptor-binding protein, PKC-alpha, determination, CRKII, Laboratory, aquaporin, PKACA, Mpk2, Aminosaeure, Mus domesticus, Crko, ribosomal RNA, p42mapk, CASP-14, Sialic acid-binding Ig-like lectin 1, ureteric tree, p38-alpha, House Mouse, PRKACA, Pkaca, Crk-II, eIF3, p38MAPK, p38a, p38ALPHA, Hog, MAP kinase 1 activity., collecting tubule, LeMPK3, P44ERK1, p44mpk, responsivity, symptoms, Dp38, mitogen-activated protein kinase activity, Kinase, Analysis, RK, SAPK2, Isotopically-Coded Affinity Tagging, Mass Spectrum Analysis, Adapter protein GRID, SER, increased, Granular, amino acids, P167, regulation of aquaporin permeability, Analyses, p180, Genomes, pp42, p185, TIF32, Swiss Mice, proteins, arcuate renal tubule, kidney collecting duct, MP kinase activity, AHA1, Grf40, Hematopoietic cell-associated adapter protein GrpL, MBP kinase II activity, EIF3, Eif3, "mice C57BL/6xCBA/CaJ hybrid" RELATED misspelling [], house mouse, associated, Tagging, TL, Stable Isotope Labeling, CAM2, GRBLG, RER, screening, MNK1, Mnk1, MAP kinase 2 activity, CAMKD, CAMKB, renal collecting tubule, 6.3.2.-, Aminokarbonsaeure, Camki, ERK-1, mouse, ERK-2, kidney collecting tubule, Erk1, ERK1, ERK2, Erk2, A230093K24Rik, PMK-2, PMK-1, Spectrum Analysis, mice C57BL/6xCBA/CaJ hybrid, PMK-3, GrbX, GRBX, Spectroscopy, CSBP, p41mapk, count, eIF3-p170, Double ring-finger protein, Syn, MAPK, Mini-ICE, concluding remarks, P38, GRAP-2, C14orf3, Mus musculus, mKIAA0139, SH3-SH2-SH3 adapter Mona, GADS, Caspase-14 subunit p10, JTV-1, Endoplasmic Reticulum, Camk2, regulation of aquaporin, mice, conclusion, Swiss Mouse, Mona, Spectrometry, signs, p38alpha, p38, Prkm15, Caspase-14 subunit p19, whole genome, Ck2b, eIF-3, MICE, Mtap2k, c-Crk, Sheep erythrocyte receptor, Prkm14, domesticus, C78273, summary, Proto-oncogene c-Crk, CSBP2, HUMKER1A, CSBP1, p41, p40, rough ER, P44MAPK, AAG6, p44, Csbp2, Acids, Mouse, Csbp1, CAMK2, Protein Kinase, CAMK1, accessory, 9030612K14Rik, p44erk1, 3.4.22.-, CaMK II, Grf40 adapter protein, 8030469K03Rik, Eif3s10, number, Aminocarbonsaeure, Gene, mini-ICE, Spectrum Analyses, Isotope-Coded Affinity, Exip, GRB-2-like protein, presence, supernumerary, CrkIII, PRKM15, p38Hog, HS44KDAP, conclusions, AA407128, Gads, House, PRKM14, Mass, Gene Products, Mus musculus domesticus, smooth ER, Prkm1, Prkm3, p42-MAPK, Isotopically-Coded Affinity, Mice, EXIP, Mass Spectroscopy, ERK, Rough Endoplasmic Reticulum, PRKM1, reactivity, PRKM3, PRKM2, JTV1, eIF3-theta, Siglec-1, Swiss, EIF3S10, Grf-40, AI848995, "mouse" EXACT common_name [], BC023857, p42 mitogen-activated protein kinase activity, Crk-III, ATP-protein phosphotransferase, ATP:protein phosphotransferase (MAPKK-activated) activity, GRB2L, junctional tube, "Mus muscaris" RELATED misnomer [], Erk-1, GRID, Stable, Isotope-Coded Affinity Tagging, species, STK26, p38-2, [d]-CaMKII, myelin basic protein kinase activity, CD169, tubulus renalis colligens, RING finger protein 19A, SAPK2A, data, findings, Esrk1, Proteins, A830012B05Rik, MAP-2 kinase activity, Protein GADS, Labeling, Cell, Crk-I, Mus muscaris, polypeptide, p38delta, Isotope, count in organism, PDIP38, Mus, Stable Isotope, chemical analysis, Protein, collecting duct system, MBP kinase I activity, collecting duct, membrane bound ribosome, PKCD, 2810011D23Rik, Isotope Coded Affinity Tagging, Mass Spectrum Analyses, PKCA, free ribosome, tubulus renalis arcuatus, Mass Spectrum, Ribosome, Kinases, mitogen activated kinase activity, increased number, P42MAPK, Mxi2, POLD4, RATCAMKI, House Mice, Sapk2A, Crk1, Crk3, Isotope Labeling, MAPK2, CSPB1, Amino, MAPK1, Affinity Tagging, Isotopically-Coded, Laboratory Mice, Dorfin, Protein Gene Products, "house mouse" EXACT genbank_common_name [], present in greater numbers in organism, Gene Proteins, 38 kDa DNA polymerase delta interaction protein, AU018647, ERT1, Ert2, CRK1, ERT2, p44-MAPK, p44-ERK1, Isotope-Coded, Granular Endoplasmic Reticulum, assay, quantitative, response, p44mapk, Laboratory Mouse, presence or absence in organism3405http://gpmdb.thegpm.org/~/dblist_gpmnum/gpmnum=GPM32320018959dbgap_ncbi~0patentfamilies~0rfam~0merops~0complex-portal~0uniprot~0wormbaseparasite~0embl-covid19~0reactome~0emdb~0wgs_masters~0ebiweb_resources~0opentargets_genetics~0biomodels_all~0ipd-mhc~0ebiweb_teams~0taxonomy~0genome_assembly~0sc-experiments~0ebiweb_people~0enzymeportal_enzymes~0ipd-nhkir~0cellosaurus~0pdbe~0chebi~0patentproteins~0interpro7~0uniref~0chembl~0pdbekb~0gpcrdb~0hgnc~0sc-genes~0intact~0rhea~0ebiweb_training~0alphafold~0imgt-hla~0patentnucleotides~0ensemblroot~0eva_studies~0non-coding~0europepmc~0pubmed~1identifiers_registry~0pdbechem~0hpa-covid19~0eva-variants-covid19~0biosamples~0gwas_catalog~0biotools~0tls_masters~0mesh~0coding~0sra~0opentargets~0efo~0embl-pathogen~0project~0pride~1human_diseases~0geo_datasets~0embl~0treefam~0uniparc~0ols~0dgva~0intenz~0go~0tsa_masters~0biosamples-covid19~0ebiweb_corporate~0omim~0lrg~0earlycause-molecular-sequences~0ipd-kir~0empiar~0rnacentral~0orcid_data_claims~0gpmdb~2lineage-covid19~0metagenomics~0pfam~0pride archive~1varsite~00Resource Reanalysis0.00.00.0104873534855027760.01.0falseDeep Proteomic Profiling of Vasopressin-Sensitive Collecting Duct CellsData from ProteomeXchange, PXD ID: PXD002434. File: 335.mzml. Published as part of Am J Physiol Cell Physiol. 2015 Aug 26:ajpcell.00214.2015 and Am J Physiol Cell Physiol. 2015 Aug 26:ajpcell.00213.2015 2015-10-06GPM3232001895926310817PXD002434PXD002434