{"database":"iProX","file_versions":[],"scores":null,"additional":{"omics_type":["Proteomics"],"submitter":["Chao Liu"],"species":["Homo Sapiens"],"full_dataset_link":["http://www.iprox.org/page/project.html?id=IPX0016812000"],"submitter_email":["liuchaobuaa@buaa.edu.cn"],"submitter_affiliation":["Beihang University"],"sample_protocol":[""],"repository":["iProX"],"data_protocol":[""],"additional_accession":[]},"is_claimable":false,"name":"Longitudinal quality control proteomics dataset of 293T cells acquired on an Orbitrap Astral mass spectrometer for Apus workflow validation","description":"This dataset was generated to validate the real-time quality control and automated data analysis capabilities of Apus, an end-to-end solution for large-cohort mass spectrometry-based proteomics. The dataset consists of 23 longitudinally acquired data-dependent acquisition (DDA) runs from HEK 293T cell digest samples, prepared and analyzed under routine laboratory operating conditions on an Orbitrap Astral mass spectrometer (Thermo Scientific) coupled to a Vanquish Neo nanoflow LC system. The dataset was processed through the complete Apus automated workflow, including real-time data aggregation (ApuPickup), parallelized protein identification (ApuPioneer), high-throughput label-free quantification (ApuHorizon), and comprehensive quality control (ApuMonitor), to demonstrate the system's capability for proactive quality management in a live laboratory setting.","dates":{"publication":"Fri Apr 24 00:00:00 BST 2026"},"accession":"PXD077571","cross_references":{"TAXONOMY":["9606"]}}