JPOST Repositoryapplication/xmlhttps://storage.jpostdb.org/JPST001907/files/Dataset%20that%20was%20analysed.xlsxhttps://storage.jpostdb.org/JPST001907/files/report_220815.xlsxhttps://storage.jpostdb.org/JPST001907/files/report.pr.matrix_220815.xlsxhttps://storage.jpostdb.org/JPST001907/files/Orbi3_G90_T120_DD3_DIA.rawhttps://storage.jpostdb.org/JPST001907/files/Orbi3_G90_T120_DD6_DIA.rawhttps://storage.jpostdb.org/JPST001907/files/Orbi3_G90_T120_DD7_DIA.rawhttps://storage.jpostdb.org/JPST001907/files/Orbi3_G90_T120DD1_DIA.rawhttps://storage.jpostdb.org/JPST001907/files/Orbi3_G90_T120_N5_DIA.rawprimaryOK200ProteomicsClaudia CardenasHomo Sapiens (human)https://repository.jpostdb.org/entry/JPST001907University of TartujPOSTData Set., ContracturesCDF, Bru, l(1)VE614, Raw, Gene, protein, nutcracker syndrome, Computer, precursor, protein-containing complex, peptide, Polypeptides, Cut, POF, peptido, l(1)7Ba, l(1)7Bb, DmelCG1768, HILDA, Gene Products, AGAMOUS-like 61, Del(8)44H, Software Engineering, protein aggregate, Computer Program, DiA, Application, NCS, Svc, Open Source Softwares, l(2)k07135, peptides, Software Application, Open, Open Source Software, Computer Programs and Programming, DIASP, kf, DIA, Dia, CG11387, Computer Software Application, 4-(4-dihexadecylaminostyryl)N-methylpyridium iodide, Tools, DmelCG11387, 38E.16, CT, peptidos, DIA2, Applications Software, Open Source, Computer Software, protein complex, Desmoplastic astrocytoma of infancy, Proteins, Ct, RNS, CG1768, DRF2, Peptide, Source Softwares, Software Tools, Tool, Programs, polypeptide, Program, Computer Applications, ms(2)04138, Desmoplastic infantile astrocytoma, Software Tool, native protein, Renal Nutcracker Phenomenon, MLPLI, Protein, Computer Applications Software, Computer Applications Softwares, Softwares, Dias, BcDNA:GH10590, Software, parent ion, Software Applications, Col4a-1, Protein., Source Software, POF2, F27C12_24, F27C12.24, Engineering, Protein Gene Products, Computer Programs, Gene Proteins, Applications, Applications Softwares, precursor ion, Left renal vein entrapment syndrome, DIANA, Peptid, Polypeptide, Computer Software ApplicationsfalseDupuytren’s contracture datasetSamples were injected into Thermo ScientificTM DionexTM UltimateTM 3000 RSLCnano systems equipped with NCS-3500RS (microflow) module and Q Exactive Plus – OrbitrapTM spectrometer (Thermo Fisher Scientific) operated in Data-Independent Acquisition (DIA) mode for peptide and protein quantification. Raw data was processed and analyzed by DIA-NN software using default parameters. Q value (FDR) cut-off on precursor and protein level was applied 1%. All selected precursors that passed the filters were used for quantification. Mon Oct 30 00:00:00 GMT 2023PXD0378239606