MassIVEapplication/xmlftp://massive.ucsd.edu/v02/MSV000083429/primaryOK2000000ProteomicsBarbara BayerLTQ Orbitrap EliteNitrosopumilus Piranensis D3cNitrosopumilus Adriaticus Nf5Nitrosopumilus Maritimus Scm1 (ncbitaxon:436308)https://massive.ucsd.edu/ProteoSAFe/dataset.jsp?task=3f4cb1c9178e4fa893162e8fdd268fd3University of Viennabarbara.bayer@outlook.comMassIVE279[C] Carbamidomethylation[M] Oxidation[N-term] Acetylationbis(hydridooxygen)(O--O), Nitrosopumilus maritimus strain SCM1, HOOH, Therapy, Archaebacteria, Archaeobacteria, Beliefs, ammonia, determination, H2O2, amoniaco, Sprain, Ammoniak, dihydrogen(peroxide), number, célula inicial (Spanish, Oxydol, catalase 2, HYDROGEN PEROXIDE, Candidatus Nitrosopumilus adriaticus, stem cell (related), Cultural Backgrounds, presence, dihydrogen dioxide, results, initial (exact), Mendosicutes, Belief, CATALASE, Background, count in organism, Cultural Background, hydrogen peroxide, exact), Cultures, 始原細胞 (Japanese, Cultural, Strain, T12J5.2, proteomic analysis, prokaryotes, NH3, [NH3], Sprains, R-717, Archebacteria, Candidatus Nitrosopumilus piranensis, Backgrounds, ammoniac, Hydrogen peroxide, ethnicity, perhydrol, dioxidane, Metabacteria, co-culture, archaea, Catalase A, chemical analysis., Cultural Relativisms, dihydrogen peroxide, Monera, Treatments, Manganese Catalase, Seattle Aquarium strain SCM1, AMMONIA, density, Catalase T, Therapeutic, Prokaryotae, prokaryote, spirit of hartshorn, [OH(OH)], Nitrosopumilus maritimus str. SCM1, azane, Archaeon, Therapies, Ammonia, Customs, Relativisms, Treatment, Strains, Procaryotae, assay, culture, quantitative, Relativism, meristemoid (exact), Cultural Relativism, Strains and Sprains, Mn Catalase, Prokaryota, presence or absence in organismDNA Oxidative, Oxidative Stress, Archaebacteria, Archaeobacteria, ammonia, Antioxidative, amoniaco, Ammoniak, Antioxidative Stress, Nitrative Stress, Anti-oxidative Stresses, Damage, Mendosicutes, Stresses, Oxidative Nitrative Stress, Oxidative Nitrative, Oxidative DNA, Oxidative, Stress Injury, Oxidative and Nitrosative Stress, Oxidative Nitrative Stresses, responsivity, Nitro-Oxidative Stress, Oxidative Cleavages, prokaryotes, DNA Oxidative Damages, Nitro-Oxidative Stresses, NH3, Oxidative Injury, [NH3], R-717, DNA Damage, Archebacteria, Oxidative Damages, reactivity, ammoniac, Oxidative Injuries, Injury, Anti-oxidative Stress, Metabacteria, DNA Oxidative Damage, archaea, Oxidative Cleavage, Cleavage, Oxidative DNA Damages, Monera, Anti-oxidative, Nitro-Oxidative, AMMONIA, Oxidative Stress Injuries, Oxidative Stresses, Anti oxidative Stress, Oxidative DNA Damage, Prokaryotae, prokaryote, Antioxidative Stresses, spirit of hartshorn, Stress, azane, Archaeon, Ammonia, Oxidative Stress Injury, Procaryotae, response, DNA, Nitro Oxidative Stress, Oxidative Damage., Prokaryota, Oxidative Damage0trueThe proteomic response of three marine ammonia-oxidizing archaea towards oxidative stressThree strains of ammonia-oxidizing archaea, Nitrosopumilus adriaticus NF5, Nitrosopumilus piranensis D3C and Nitrosopumilus maritimus SCM1, were grown under different culture conditions: in the presence of catalase (Catalase), in co-culture with the alphaproteobacterium O. alexandrii (O. alexandrii), without H2O2 scavenger (H2O2 inhibited) and without H2O2 scavenger at high initial cell density (H2O2 non-inhibited). Cultures from all treatments were grown in three biological replicates. For proteomic analysis, technical replicates (derived from two separate MS/MS runs) were combined. Results from differential expression analysis (using the DESeq Bioconductor package in R) are provided.Mon Feb 11 07:41:00 GMT 2019MSV000083429