{"database":"MassIVE","file_versions":[{"headers":{"Content-Type":["application/json"]},"body":{"files":{"Other":["ftp://massive-ftp.ucsd.edu/v02/MSV000083581/"]},"type":"primary"},"statusCode":"OK","statusCodeValue":200}],"scores":{"citationCount":0,"reanalysisCount":0,"viewCount":0,"searchCount":0},"additional":{"submitter":["Stoyan Stoychev"],"full_dataset_link":["https://massive.ucsd.edu/ProteoSAFe/dataset.jsp?task=d0927ec136e84383b226aa223e241a35"],"submitter_email":["SStoychev@csir.co.za"],"sample_protocol":[""],"repository":["MassIVE"],"file_size":["64"],"ptm_modification":["UNIMOD:4 - \"Iodoacetamide derivative.\"","UNIMOD:36 - \"Di-Methylation.\"","UNIMOD:34 - \"Methylation.\"","UNIMOD:35 - \"Oxidation or Hydroxylation.\""],"data_protocol":[""],"omics_type":["Proteomics"],"instrument_platform":["TripleTOF 6600"],"species":["Homo Sapiens (ncbitaxon:9606)"],"submitter_affiliation":["Council for Scientific and Industrial Research"],"name_synonyms":["Human, mamma, mammary region, Breasts, human being, simple tissue., Man (Taxonomy), Homo sapiens, Modern Man, Lobe of mammary gland, Modern, Lobe of breast, mammary part of chest, Tissue, Lactiferous gland, Man, Brustdruese, human, humans, glandula mammaria, breast"],"description_synonyms":["mamma, mammary region, Breasts, human being, Activity, ion, Laboratory, Effects, Modern, average., Longterm Effect, Lactiferous gland, FBN, Research Priorities, precursor, Brustdruese, not genetically inherited, glandula mammaria, Long Term, Human, ACMICD, Research Ethics, Priority, Homo sapiens, Ionen, ECTOL1, Parafilm, Lobe of mammary gland, Long Term Effects, Research Activities, MFS1, simple tissue, Research Activity, Laboratory Research, Effect, Republic of South Africa, Man, WMS, WMS2, Research and Development, Priorities, parent ion, Union of South Africa, Man (Taxonomy), Research, Longterm, iones, Lobe of breast, mammary part of chest, Tissue, MASS, Long-Term, ions, human, Longterm Effects, Activities, OCTD, Pressures, precursor ion, Ion, Modern Man, SSKS, 2018, Long-Term Effect, Development and Research, Research Priority, GPHYSD2, Long-Term Effects, humans, breast, SGS"],"citation_count":["0"],"additional_accession":["PXD013107"]},"is_claimable":true,"name":"20180725 Buthelezi TripleTOF FFPE of human breast tissue","description":"Sindisiwe Buthelezi generated these \"shotgun\" data in July of 2018 on a SCIEX TripleTOF 6600 at the Council for Scientific and Industrial Research in Pretoria, South Africa.  The twelve Information-Dependent Acquisition experiments compared one-slide-at-a-time pressure-based paraffin removal (A1-4) with all-at-once paraffin removal (A5-8) with freshly frozen samples (A9-12) using human breast tissue under CSIR Research Ethics Committee reference 213/2017.  After conversion to mzML, a total of 474,722 tandem mass spectra were available, of which 39% resulted from doubly-charged precursor ions.  Over all twelve experiments, tandem mass spectra were acquired at a rate of 8.40 Hz.  MS/MS scans averaged a peak density average of 54 peaks per spectrum.\n","dates":{"publication":"Fri Mar 15 10:03:00 GMT 2019"},"accession":"MSV000083581","cross_references":{}}