{"database":"MassIVE","file_versions":[{"headers":{"Content-Type":["application/json"]},"body":{"files":{"Other":["ftp://massive-ftp.ucsd.edu/v10/MSV000098679/"]},"type":"primary"},"statusCodeValue":200,"statusCode":"OK"}],"scores":null,"additional":{"submitter":["John T. Melchior","Snigdha Sarkar"],"full_dataset_link":["https://massive.ucsd.edu/ProteoSAFe/dataset.jsp?task=2202c30f64ed47c6b046f0ea8348fb5f"],"submitter_email":["john.melchior@pnnl.gov","snigdha.sarkar@pnnl.gov"],"sample_protocol":[""],"repository":["MassIVE"],"file_size":["404"],"ptm_modification":["UNIMOD:737 - \"Sixplex Tandem Mass Tag.\"","UNIMOD:35 - \"Oxidation or Hydroxylation.\""],"data_protocol":[""],"omics_type":["Proteomics"],"instrument_platform":["Q Exactive HF-X"],"species":["Synechococcus Elongatus Pcc 7942 (ncbitaxon:1140)"],"submitter_affiliation":["Pacific Northwest National Laboratory"],"additional_accession":["PXD066739"]},"is_claimable":false,"name":"S. elongatus PCC 7942 Limited Proteolysis Structural Proteomics (JM-PB-DP3), TPP-MS-TMT10","description":"The purpose of this experiment was to investigate structural alterations in proteins involved in central carbon metabolism and photosynthetic electron transfer pathways in Synechococcus elongatus PCC 7942. Sample data was obtained from S. elongatus PCC 7942 cell lysates treated across 10 temperatures (37 to 82 deg C in 5 deg C increments, prepared using thermal proteome profiling by mass spectrometry (TPP-MS), and fractionated for TMT10 proteomic analysis. Data was searched with MS-GF+ using PNNL's DMS Processing pipeline, followed by Tandem Mass Tag 10-Plex (TMT10) quantitation using PlexedPiper.","dates":{"publication":"Tue Jul 29 20:02:00 BST 2025"},"accession":"MSV000098679","cross_references":{}}