<HashMap><database>MetaboLights</database><file_versions><headers><Content-Type>application/xml</Content-Type></headers><body><files><Tabular>ftp://ftp.ebi.ac.uk/pub/databases/metabolights/studies/public/MTBLS13092/m_MTBLS13092_LC-MS_negative_reverse-phase_metabolite_profiling_v2_maf.tsv</Tabular><Txt>ftp://ftp.ebi.ac.uk/pub/databases/metabolights/studies/public/MTBLS13092/a_MTBLS13092_LC-MS_negative_reverse-phase_metabolite_profiling.txt</Txt><Txt>ftp://ftp.ebi.ac.uk/pub/databases/metabolights/studies/public/MTBLS13092/s_MTBLS13092.txt</Txt><Txt>ftp://ftp.ebi.ac.uk/pub/databases/metabolights/studies/public/MTBLS13092/i_Investigation.txt</Txt><Wiff>ftp://ftp.ebi.ac.uk/pub/databases/metabolights/studies/public/MTBLS13092/FILES/RAW_FILES/241118-CI090.wiff.zip</Wiff></files><type>primary</type></body><statusCode>OK</statusCode><statusCodeValue>200</statusCodeValue></file_versions><scores/><additional><ftp_download_link>ftp://ftp.ebi.ac.uk/pub/databases/metabolights/studies/public/MTBLS13092</ftp_download_link><metabolite_identification_protocol>&lt;p>This study aims to detect the bile acid profile in fecal samples and identify specific bile acid types by comparing them with bile acid reference standards.&lt;/p>soft JhengH</metabolite_identification_protocol><repository>MetaboLights</repository><study_status>Public</study_status><ptm_modification></ptm_modification><instrument_platform>Liquid Chromatography MS - negative - reverse phase</instrument_platform><chromatography_protocol>&lt;p>This project employs a Waters ACQUITY I-Class ultra-high-performance liquid chromatography system. Chromatographic separation of target compounds is achieved using an ACQUITY UPLC BEH C18 1.7μm column (1.7μm, 2.1 × 100 mm, Waters). LC mobile phase A consists of 0.1% formic acid in water containing 5 mM ammonium acetate, while phase B is acetonitrile:methanol = 3:1. The column oven temperature is set to 35°C, the sample tray to 10°C, and the injection volume to 2 μL.&lt;/p></chromatography_protocol><publication>Integrative analysis of gut microbiota, bile acid pathways, and immune dysregulation in dyslipidemia models.</publication><submitter_name>Jiayue Xia</submitter_name><submitter_affiliation>southeast university</submitter_affiliation><organism_part>feces</organism_part><technology_type>mass spectrometry</technology_type><disease></disease><extraction_protocol>&lt;p>Weigh an appropriate amount of sample into a 2 mL centrifuge tube, add steel balls, and add 1 mL of acetonitrile:methanol:water solution (2:2:1, V/V/V). Vortex for 30 seconds. Homogenize at 25 Hz for 10 min, followed by ultrasonic extraction in an ice-water bath for 10 min and vortexing for 5 min. Centrifuge the sample at 4°C, 12,000 rpm for 10 min. Finally, transfer 500 μL of the supernatant through a 0.22 μm filter membrane for injection and analysis. Quality control samples must be included concurrently with the test samples.&lt;/p></extraction_protocol><organism>Rattus norvegicus domestica</organism><full_dataset_link>https://www.ebi.ac.uk/metabolights/MTBLS13092</full_dataset_link><author>Jiayue Xia. southeast university. School of Public Health, Southeast University, Nanjing, China. 230229010@seu.edu.cn.</author><data_transformation_protocol>&lt;p>Differential bile acids were identified through a univariate statistical analysis, with statistical significance defined as a P-value less than 0.05. All mass spectrometric data acquisition and quantitative analysis of target compounds were performed using SCIEX Analyst Workstation Software (Version 1.7.2) and Sciex OS 2.0.1.&lt;/p></data_transformation_protocol><study_factor>Treatment</study_factor><submitter_email>230229010@seu.edu.cn</submitter_email><sample_collection_protocol>&lt;p>Seven-week-old SD rats were fed either a standard diet containing 10% of energy from fat or a high-fat diet containing 40% of energy from fat for 18 weeks. Fecal samples were collected and stored at -80°C for subsequent determination of the bile acid profile in the fecal samples.&lt;/p></sample_collection_protocol><omics_type>Metabolomics</omics_type><study_design>Dyslipidemia</study_design><study_design>Feces</study_design><study_design>targeted metabolites</study_design><study_design>Bile Acid Measurement</study_design><curator_keywords>Dyslipidemia</curator_keywords><curator_keywords>Feces</curator_keywords><curator_keywords>targeted metabolites</curator_keywords><curator_keywords>Bile Acid Measurement</curator_keywords><mass_spectrometry_protocol>&lt;p>This project utilizes a SCIEX 6500 QTRAP+ triple quadrupole mass spectrometer equipped with an IonDrive Turbo V ESI ion source for mass spectrometry analysis in multiple reaction monitoring (MRM) mode. Ion source parameters are as follows: Curtain Gas = 35 psi, IonSpray Voltage = -4500V, Temperature = 550°C, Ion Source Gas 1 = 50 psi, Ion Source Gas 2 = 55 psi.&lt;/p></mass_spectrometry_protocol><metabolite_name>Dehydrolithocholic acid</metabolite_name></additional><is_claimable>false</is_claimable><name>Integrative analysis of gut microbiota, bile acid pathways, and immune dysregulation in dyslipidemia models_Bile acid profile of rat fecal samples</name><description>&lt;p>This study aims to compare changes in bile acid profiles between fecal samples from rats fed a standard control diet and those fed a high-fat diet.&lt;/p></description><dates><publication>2025-10-04</publication><submission>2025-10-04</submission></dates><accession>MTBLS13092</accession><cross_references/></HashMap>