Screening and identification of significantly differential metabolites were based on multivariate statistical model and univariate statistical analysis. The orthogonal partial least squares discriminant analysis (OPLS-DA) model was established to evaluate the variable importance in projection (VIP) of each metabolite feature, which reflected the contribution degree of metabolites to sample grouping difference. Combined with the results of student’s t-test, the differential metabolites were screened with the threshold of VIP > 1 and p < 0.05. Metabolites that met both statistical criteria were defined as significantly differential metabolites in the root of Vicia sativa, ensuring the reliability and scientificity of differential metabolite screening results.
"],"repository":["MetaboLights"],"study_status":["Public"],"ptm_modification":[""],"instrument_platform":["Liquid Chromatography MS - negative - reversed-phase-chromatography","Liquid Chromatography MS - positive - reversed-phase-chromatography"],"chromatography_protocol":["Chromatographic separation was performed on an ultra-high performance liquid chromatography system coupled with a mass spectrometer. The detailed chromatographic parameters are listed as follows:
Parameter Value [Chromatography Instrument]: Vanquish UHPLC System, Thermo Fisher Scientific, USA
Parameter Value [Autosampler model]: Vanquish Split Sampler HT, Thermo Fisher Scientific, USA
Parameter Value [Column model]: BEH C18 column (100 mm×2.1 mm i.d., 1.7 µm), Waters Corporation, USA
Parameter Value [Guard column]: BEH C18 VanGuard pre-column (5 mm×2.1 mm i.d., 1.7 µm), Waters Corporation, USA
The column temperature and autosampler temperature were set to conventional stable conditions to ensure stable chromatographic separation. Gradient elution was carried out with classic mobile phases for plant metabolomics analysis, and the flow rate was maintained at a constant level to achieve effective separation of diverse metabolites in root samples.
"],"publication":["Integrative transcriptomic, metabolomic, and physiological analyses reveal the root adaptive mechanisms of common vetch (Vicia sativa L.) under drought stress."],"submitter_name":["Huang Die"],"submitter_affiliation":["Yunnan Agricultural University"],"organism_part":["Root"],"technology_type":["mass spectrometry assay"],"disease":[""],"extraction_protocol":["The root samples stored at −80 °C were taken out and ground fully into fine powder in liquid nitrogen. An appropriate amount of sample powder was weighed, and the metabolites were extracted with a conventional plant metabolomics extraction solvent. The mixture was subjected to vortex oscillation, low-temperature ultrasonic extraction and standing precipitation to fully release endogenous metabolites from root tissue cells. After centrifugation at high speed and low temperature, the supernatant was collected, and the obtained solution was purified and filtered to obtain the sample solution for subsequent UHPLC-MS/MS detection and metabolomics profiling analysis.
"],"organism":["Vicia sativa"],"full_dataset_link":["https://www.ebi.ac.uk/metabolights/MTBLS15164"],"author":["Huang Die. Yunnan Agricultural University. 17387890017@163.com."],"data_transformation_protocol":["All raw LC-MS spectral data acquired from UHPLC-Q Exactive system were imported into Progenesis QI software (Waters Corporation, Milford, USA) for systematic preprocessing. The software automatically completed a series of standardized data optimization procedures, including baseline filtering to eliminate background noise interference, accurate peak recognition and integration to extract metabolite characteristic peaks, retention time correction to eliminate chromatographic retention deviation, and peak alignment to unify the spectral peak information of different samples. After preprocessing, a standardized data matrix containing retention time, mass-to-charge ratio (m/z) and corresponding peak intensity of all metabolite features was constructed. Subsequently, the acquired MS and MS/MS fragment information was matched with the MJDBPM database (Meiji Biotechnology proprietary plant metabolite database) to annotate and identify the metabolites in Vicia sativa root samples.
"],"study_factor":["Treatment"],"submitter_email":["17387890017@163.com"],"sample_collection_protocol":["Healthy and uniform root tissues of Vicia sativa were collected as experimental samples during the corresponding growth period. The collected root samples were immediately rinsed with pre-cooled ultrapure water to remove surface impurities and residual soil. After wiping off surface moisture with sterile filter paper, the samples were quickly frozen in liquid nitrogen to terminate all metabolic activities. Subsequently, the frozen samples were transferred to a −80 °C ultra-low temperature refrigerator for long-term storage, which effectively avoided metabolite degradation and ensured the stability and authenticity of endogenous metabolites in plant roots for subsequent metabolomics analysis.
"],"omics_type":["Metabolomics"],"study_design":["Thermo Scientific Vanquish UHPLC System","Vicia sativa","Metabolomics","Root","untargeted analysis","drought","experimental blank","Q Exactive"],"curator_keywords":["Thermo Scientific Vanquish UHPLC System","Vicia sativa","Metabolomics","Root","untargeted analysis","drought","experimental blank","Q Exactive"],"mass_spectrometry_protocol":["Mass spectrometry detection was conducted using a UHPLC-Q Exactive high-resolution mass spectrometry system. The detailed mass spectrometry parameters are shown below:
Parameter Value [Scan m/z range]: 50–1000 m/z
Parameter Value [Instrument]: UHPLC-Q Exactive hybrid quadrupole-orbitrap mass spectrometer, Thermo Fisher Scientific, USA
Parameter Value [Ion source]: Heated electrospray ionization source (HESI), operating in both positive and negative ionization modes
Parameter Value [Mass analyzer]: Orbitrap high-resolution mass analyzer coupled with quadrupole mass filter
The mass spectrometer was operated in data-dependent acquisition (DDA) mode. Full scan mass spectra were acquired with high resolution, and secondary fragment spectra were collected for qualitative and quantitative analysis of metabolites. The ion source parameters including spray voltage, sheath gas flow, auxiliary gas flow and capillary temperature were optimized to ensure high sensitivity and stability of metabolite detection.
"],"metabolite_name":["Lablaboside A","Sesartemin","3-Caffeoyl-4-feruloylquinic acid","Atracurium","4-Hydroxynonenal","Emodin 8-glucoside","Salmeterol","Spinacetin 3-(2''-apiosylgentiobioside)","3',5,6-Trihydroxy-3,4',7,8-tetramethoxyflavone 3-glucoside","N-Acetyldopamine","Coumestrol","Pithecelloside","Thr-Val-Leu","Uridine 2',3'-cyclic phosphate","Moroidin","Pseudoanisatin","Lps(18:2)","9-Hydroxy-7-megastigmen-3-one glucoside","Sulfatide(d15:1/2:0)","Clusin","11(r)-hede","Kaempferol 3-(6''-malonylglucoside)-7-glucoside","(S)-Isocorydine","PIP(PGF1alpha/18:1(9Z))","13(S)-HpODE","CDP-DG(PGD1/i-15:0)","Gly-Pro-Arg","Matsutakeside I","Gly-Gly","Albocycline","Gamma-Glutamyl-S-methylcysteinyl-beta-alanine","Cladospolide B","Breyniaionoside C","3-Feruloyl-1,5-quinolactone","Pantoyllactone glucoside","Koninginin G","Agnuside","2'-O-Methylguanosine","PG(6 keto-PGF1alpha/20:1(11Z))","PIP(PGF2alpha/18:0)","Diosmetin 7-Neohesperidoside","3H-Indole","Alpha-Ionol O-[arabinosyl-(1->6)-glucoside]","54-Deoxyciguatoxin","Chrysoeriol","7-Hydroxyheptanoic acid","6-Deoxyerythronolide B","Avocadyne 2-acetate","A-L-Fucopyranosyl-(1->2)-b-D-galactopyranosyl-(1->2)-D-xylose","Glutarate semialdehyde","[12]-Gingerdione","LysoPE(0:0/18:2(9Z,12Z))","PIP(PGF1alpha/22:4(10Z,13Z,16Z,19Z))","6,9-Octadecadienedioic acid","Kaempferol 3-(2G-apiosylrobinobioside)","beta-Asp-Phe","Palmitaldehyde","(-)-Pinoresinol","Avenacoside A","Phenol A","N-Acetylanonaine","Pantothenic acid","Dgmg(18:3)","Apiosylglucosyl 4-hydroxybenzoate","3,3-Difluoro-5alpha-androstan-17beta-yl acetate","Araloside G","3-Hydroxy-1-indanone","Mevalonic acid-5P","Shikimic acid","Quercetin 3-(4''-acetylrhamnoside) 7-rhamnoside","PIP(PGF2alpha/16:0)","Petunidin 3-(6''-p-coumaroyl-glucoside)","Araloside B","Araloside C","Soyasaponin II","GPSer(4:0/14:1)","Neosaxitoxin","Acrasin","Soyasaponin IV","Gancaonin Q","Brartemicin","6,7-Dihydro-7-hydroxyciguatoxin","Dlcl(14:1/14:1)","Kaempferol 3-[2''-(6'''-coumaroylglucosyl)-rhamnoside] 7-glucoside","PA(PGF2alpha/2:0)","(R)-Heraclenol 2'-(3-methyl-2-butenoate)","Saccharumoside C","Leu-Ala-Leu","Epijuvabiol","2'-hydroxypyridoxol","Lpi(18:3)","Gancaonin e","3-Hydroxybenzoic acid","Luteolin-7,3'-di-O-Gflucoside","gamma-Glu-Ile","Lycopersiconolide","Leucanthoside","L-glycero-D-manno-Heptose","PGP(6 keto-PGF1alpha/20:4(5Z,8Z,11Z,14Z))","Diazinon","Glucosyl (E)-2,6-Dimethyl-2,5-heptadienoate","Cycloartocarpin","Coclaurine","Ile-Glu","Isocitric acid","7,8-Dihydrovomifoliol 9-[rhamnosyl-(1->6)-glucoside]","DG(5-iso PGF2VI/a-13:0/0:0)","Eremopetasinorol","N-Lauroylglycine","Adenosine","GroPIns","Hoduloside I","4-(beta-D-glucosyloxy)-3-hydroxy-benzoic acid","Trigofoenoside F","Asp-Leu-Leu","PI(5-iso PGF2VI/22:5(4Z,7Z,10Z,13Z,16Z))","Apigenin 7-O-beta-D-rutinoside","Stearoyl lysophosphatidylethanolamine","Benzoic acid","Betonicine","(7E,7'R,8'R)-e-Viniferin 3',5'-diglucoside","Trp-Glu","(S,E)-Zearalenone","PIP(PGF1alpha/20:0)","Ala-Leu","Fahfa(16:0/10:0)","Traumatic acid","Tetradecanedioic acid","DG(5-iso PGF2VI/0:0/i-14:0)","Docosahexaenoic acid","Isoxanthohumol","Pe(18:2/0:0)","HexCer(18:1_3O/14:0_(2OH))","Asiaticoside B","Piceol","DMH-1","Musabalbisiane B","10-Acetoxyligustroside","Gly-Ala-Arg","5-Hydroxy-7,3',4'-trimethoxy-8-methylisoflavone 5-neohesperidoside","DG(TXB2/a-13:0/0:0)","Clovin","Ser-Ile","4-Tert-Amylphenol","Cyanidin 4'-glucoside","Cycloheterophyllin","CDP-DG(5-iso PGF2VI/16:1(9Z))","D-Myoinositol 4-phosphate","Spinosin","LysoPE(0:0/16:0)","11,12-Dimethylrosmanol","Assamsaponin A","1,6-anhydro-N-acetyl-beta-muramate","Ethyl (S)-3-hydroxybutyrate glucoside","Noradrenaline (L-)","Cyclocalopin D","Prenyl glucoside","L-Threonic acid","PA(PGD2/i-17:0)","NeuNGc","Glu-Val-Leu","(-)-11-hydroxy-9,10-dihydrojasmonic acid 11-beta-D-glucoside","Gancaonin B","Gancaonin I","12,13-Epoxy-9-hydroxy-10-octadecenoate","Pe(o-13:1/7:0)","Fa(18:4+2o)","Xanthosine","Glu-Val","Kaempferol 3-sophoroside 7-glucuronide","Melledonal C","Citric acid","Amaranthussaponin I","CDP-DG(PGF1alpha/20:4(8Z,11Z,14Z,17Z))","PG(6 keto-PGF1alpha/i-12:0)","5,8,12-Trihydroxy-9-octadecenoic acid","Verbascoside","D-(+)-Tryptophan","Tanacetol B","Tanacetol A","Saframycin A","3-Oxovalproic acid","8-Hydroxyhesperetin 7-[6-acetylglucosyl-(1->2)-glucoside]","3,4-Bis(methoxycarbonyl)benzoic acid","PI(6 keto-PGF1alpha/22:5(7Z,10Z,13Z,16Z,19Z))","8-Prenylnaringenin","Vignatic acid A","Pa(2:0/16:4)","7-Hydroxybutylidenephthalide 7-(6-malonylglucoside)","Medicarpin 3-O-(6'-malonylglucoside)","Lpg(20:5)","Xi-1,8,8-Trimethyl-2-oxabicyclo[3.2.1]octan-3-one","PIP(6 keto-PGF1alpha/18:0)","Quercetin 3,7-dirhamnoside","3alpha-Hydroxyoreadone","Yamogenintetroside B","Met-Phe","4-Mercaptobutyl glucosinolate","Estriol-16-Glucuronide","Camellidin II","Kaempferol 3-[glucosyl-(1->3)-rhamnosyl-(1->2)-[rhamnosyl-(1->6)-galactoside]]","Chrysoeriol 7-O-(6''-malonyl-apiosyl-glucoside)","L-malic acid","Medicagenic acid 3-O-[b-D-glucosyl-(1->6)-b-D-glucosyl-(1->3)-b-D-glucoside]","Valrubicin","Pongaglabol","Adenosine 5'-phosphosulfate","Isovitexin 7-(6'''-sinapoylglucoside) 4'-glucoside","3-Pentadecenal","Haloperidol","Asp-Met-Tyr","Kaempferol 3-glucosyl-(1->4)-rhamnosyl-(1->2)-glucoside","N-(2-methyl-4-oxooxetan-3-yl)acetamide","Dgdg(o-8:0/8:0)","Triptophenolide","Phenylethyl primeveroside","(3E,5Z)-3,5-Octadien-1-ol","PIP(PGF2alpha/18:2(9Z,12Z))","Ginsenoside re","Arg-His","CDP-DG(PGF2alpha/18:0)","D-ribose 5-phosphate","Neoacrimarine G","Ser-Ile-Ile","Acetylsoyasaponin A5","9,10-DiHOME","Soraphen O","3,5,5-Trimethyl-2-cyclopenten-1-one","Phaseolic acid","Ampeloside Bf1","PI(6 keto-PGF1alpha/20:4(5Z,8Z,11Z,14Z))","Pteroside Q","Ochratoxin B","Myristicanol A","Didymin","1-(5-Phosphoribosyl)imidazole-4-acetate","Eprosartan","(3beta,5alpha,9alpha,22E,24R)-3,5,9-Trihydroxy-23-methylergosta-7,22-dien-6-one","Fenoksan","L-Leucine","gamma-Glu-Asn","PGP(6 keto-PGF1alpha/20:1(11Z))","CDP-DG(6 keto-PGF1alpha/20:1(11Z))","Chrysaloin","Garcinia acid","Natsudaidain 3-(4-O-3-hydroxy-3-methylglutaroylglucoside)","3-Epilitsenolide D1","Phe-Met","DTDP-D-glucose","Guanosine-5'-monophosphate","Camellioside C","Camellioside D","Lippioside I","Lpa(19:2)","Ceposide D","PIP(PGF1alpha/16:0)","Paeonoside","2-Hydroxycampholonic acid","Undecanoic acid","Cryptotanshinone","(3beta,9beta)-7-Drimene-3,11,12-triol","16-Hydroxy-10-oxohexadecanoic acid","Phaeofuran B","Dimethoxane","Leukotriene D4","Suspensolide F","Tianshic acid methylester","Rhoifolin","Tyr-Trp","Egonol gentiobioside","Phenylacetylaspartic acid","Mulberrin","Val-Ile","Gentisic acid","2-hydroxypentadecanoic acid","L-Tryptophan","16,17-Dihydro-16alpha,17-dihydroxygibberellin A7 17-glucoside","CDP-DG(6 keto-PGF1alpha/18:3(6Z,9Z,12Z))","Cer(8:0_3O/12:1_(2OH))","Gulonic acid","Kaempferol 3-(6''-ethylglucuronide)","Gravacridonediol glucoside","Thymidine 5'-monophosphate","Bruceoside A","Domesticoside","CDP-DG(PGF1alpha/22:3(10Z,13Z,16Z))","Gln-Ala-Ile","Silandrin","Xanthoxylin","Melleolide","Artonol D","Kaempferol 3-(2''-rhamnosyl-6''-acetylgalactoside) 7-rhamnoside","Pisumsaponin i","Sphingosine 1-phosphate","Glu-Leu-Leu","PA(PGF1alpha/2:0)","PA(PGD1/i-17:0)","3,7-Dimethyl-5-octene-1,7-diol 1-glucoside","7alpha-Hydroxypregnenolone","Risperidone","Kuwanon F","Dihydrojasmonic acid","Kuwanon D","CDP-DG(5-iso PGF2VI/i-17:0)","2''-O-Acetylrutin","2-Hydroxy-2,6,6-trimethylcyclohexanone","Trichocarane C","PIP(5-iso PGF2VI/20:0)","Adipic acid","Vitexin 7-O-glucoside","(-)-Hydroxydihydrobovolide","21-Deoxycortisol","Kobusone","gamma-Glu-Ala","28-Glucosylsiaresinolate 3-arabinoside","Val-His-Lys","Diosmin","PIP(PGF2alpha/18:1(11Z))","Isorhoifolin","PIP(6 keto-PGF1alpha/20:2(11Z,14Z))","Homovanillic acid","Kaempferol 3-O-Rhamninoside","2,8-Dihydroxyquinoline-beta-D-glucuronide","Concentricol B","Glycerol 2-phosphate","Lyngbic acid","7-O-Demethyl-2,3-dihydro-albocycline","Herbarumin I","Niazimicin","Cynarasaponin D","7-beta-D-Glucopyranosyloxybutylidenephthalide","Blumenol C O-[apiosyl-(1->6)-glucoside]","Doxycycline","Vanilpyruvic acid","Corchorifatty acid F","Hemsloside Ma 2","Mjdbissn00000009","4-Demethylsimmondsin 2'-(E)-ferulate","N-Acetyl-L-phenylalanine","Mgmg(18:3)","Flavine mononucleotide (FMN)","Mjdbissn00000003","(+/-)-Camphoric acid","Mjdbissn00000001","Glu-Ile-Asp","Cyclomammeisin","4,5-Dihydrovomifoliol","1,3,8-Trihydroxy-4-methyl-2,7-diprenylxanthone","AzI","Hesperetin 5-O-glucoside","Fagopyrine","Thr-Arg","Aquifoliunine EIII","Physalin E","Mgmg(18:2)","Niazinin","Tuberoside A (Ullucus tuberosus)","Pyrafoline D","Physalin K","12-Hydroxydodecanoic acid","Thr-Asp","Procyanidin B3","DG(PGF1alpha/0:0/10:0)","Allantoic Acid","Corchorifatty acid A","Kaempferol-3-O-glucosyl(1-2)rhamnoside","Corchorifatty acid D","Octanoate","Hesperidin","CDP-DG(PGF1alpha/i-13:0)","TR-Saponin A","TR-Saponin C","2-hydroxynonanoic acid","CDP-DG(5-iso PGF2VI/i-20:0)","Isowertin 2''-rhamnoside","3,4',7-Trihydroxyflavone","Lucyoside L","PGP(TXB2/i-17:0)","Lucyoside M","Xi-8-Hydroxyhexadecanedioic acid","PIP(PGF2alpha/18:1(15Z))","Isolimonic acid","Phe-Cys-Tyr-Trp-Lys-Val-Cys-Trp","12-Oxo phytodienoic acid","Salicylic acid","Asperulosidic Acid","Aconitinum","Asn-Gln-Lys","Chinenoside I","(S)-Oleuropeic acid","3,4,5,2',4',6'-Hexahydroxychalcone 2'-glucoside","10-Acetoxytoxol","Corchoionol C 9-glucoside","Leucine-betaxanthin","2-n-Propyl-4-oxopentanoic acid","6-Oxabicyclo[3.1.0]hexane-2-undecanoic acid methyl ester","Lpc(20:0)","Arg-Tyr-Arg","GPSer(14:1/4:0)","DG(LTE4/i-19:0/0:0)","(-)-Blastmycinolactol","(x)-2-Heptanol glucoside","26-Desglucoavenacoside B","KB 2","(+)-Plumosol","Candicine","3-Methyl-epicatechin","Grandilobatin A","Soyasaponin A3","Epitheaflagallin 3-O-gallate","O-Demethylforbexanthone","12,13-EpOME","Brevetoxin B2","Asp-Asp-Ile","Garcimangosone C","Licoricone","Galactaric acid","Glu-Ile-Leu","4,4'-Methylenebis(2,6-di-tert-butylphenol)","Hesperetin 7-o-rutinoside","Swertiamarin","Alpha-Campholonic acid","Undecanedioic acid","8-Oxo-dGMP","CDP-DG(5-iso PGF2VI/22:3(10Z,13Z,16Z))","Bhos#20","3-Dehydroteasterone","Kaempferol 3-(6''-malonylgalactoside)","Caryoptosidic acid","Isovitexin 2''-O-glucoside","6''-O-(3-Hydroxy-3-methylglutaroyl)astragalin","Lucuminamide","(-)-Pestalotin","L-Lyxonate","Trans-Caffeic acid [apiosyl-(1->6)-glucosyl] ester","17alpha,21-Dihydroxypregnenolone","(3'x,5'a,9'x,10'b)-O-(3-Hydroxy-6-oxo-7-drimen-11-yl)umbelliferone","CDP-DG(PGF2alpha/22:6(4Z,7Z,10Z,13Z,16Z,19Z))","PIP(6 keto-PGF1alpha/20:3(8Z,11Z,14Z))","Betavulgaroside X","Geranyl beta-D-glucopyranoside","2-Methylpropyl glucosinolate","Medinoside E","GPSer(3:0/15:1)","2-hydroxymyristic acid","Congmuyenoside B","Leu-Ser","4-Hydroxybenzoic acid glucoside","Kelampayoside A","Epsilon-caprolactam","PIP(5-iso PGF2VI/20:2(11Z,14Z))","Methyl (R)-9-hydroxy-10-undecene-5,7-diynoate glucoside","2-Feruloyl-1-sinapoylgentiobiose","Trp-Tyr","Tuberonic acid","Jioglutin E","Hebevinoside XIV","11-HpODE","N-Acetyl-b-glucosaminylamine","10-Hydroxy-8-nor-2-fenchanone glucoside","Muricatacin","D-Galactofuranose","5(Z),14(Z)-Eicosadienoic Acid","PIP(PGF1alpha/18:2(9Z,12Z))","CDP-DG(PGF1alpha/i-15:0)","2'-Hydroxydaidzein","PIP(6 keto-PGF1alpha/20:1(11Z))","Uridine Monophosphate","gamma-Glu-Ser","N-Jasmonoyltyrosine","Lipoxin B4","Indican","Salvianolic acid A","Cyclo(Trp-Asp-Pro-Val-Leu)","Folic acid","PIP(PGF1alpha/18:1(11Z))","Lyciumoside IX","Deoxyinosine","(7'R,8'R)-4,7'-Epoxy-3',5-dimethoxy-4',9,9'-lignanetriol 9'-glucoside","Awobanin","Diosbulbinoside F","Myricetin 3-[glucosyl-(1->2)-rhamnoside] 7-[rhamnosyl-(1->2)-glucoside]","Pro-Arg-Pro","O-Succinyl-L-homoserine","Simmondsin 2'-ferulate","Isosakuranin","Xi-7-Hydroxyhexadecanedioic acid","28-Glucosylarjunolate 3-[rhamnosyl-(1->3)-glucuronide]","Lnape(3:0/n-15:1)","[4]-Gingerdiol 3,5-diacetate","Wallichoside (Pteris)","Octadecanedioic acid","Pheophorbide a","Narcissin","2-O-alpha-D-Galactopyranosyl-1-deoxynojirimycin","2-keto palmitic acid","Pandangolide 1a","Patuletin 3-gentiobioside","Aucubin","Gingerglycolipid B","Soyasaponin bg","Estrone 3-glucuronide","Pratenol A","Kaempferol-3-o-glucoside-7-o-rhamnoside","Carthamone","7,4'-Dihydroxyflavone","PGP(TXB2/i-20:0)","Zapoterin","9,10,13-TriHOME","Scortechinone P","N-Acetyl-L-glutamate 5-semialdehyde","Etiocholanolone","Glycyrrhizinic acid","5-O-a-L-Arabinofuranosyl-L-arabinose","Quercetin 3-O-acetyl-rhamnoside","Pelargonidin 3-(6''-malonylglucoside)","2,3-Butanediol apiosylglucoside","Sativic acid","Amurensin","Guanosine","5-Hydroxyindoleacetylglycine","(+/-)-3-(4-Hydroxyphenyl)-1,2-propanediol 4'-O-glucoside","2-Methoxy-5Z-hexadecenoic acid","PGP(TXB2/i-19:0)","Botryolide C","D-pyroglutamic acid","Fusidic Acid","Quinoside A","Atrovirisidone","Kaempferol 3-sophorotrioside","4-acetoxyphenol","Hexadecanedioic acid","9,10,16-trihydroxy palmitic acid","Demethylsuberosin","PIP(PGF2alpha/18:1(9Z))","Eriojaposide B","Amphibine H","(+)-cyclopentanecarboxylic acid","Uridine","Pentadecanal","1,2-Cyclohexanediol, 1-methyl-4-(1-methylethenyl)-","Isovanillic acid","4-Methoxy-3,4a,5-trimethyl-4,5,6,7,8,9-hexahydrobenzo[f][1]benzofuran-8a-ol","2''-(6-Acetylglucosyl)astragalin","Botryoloic acid","Dactylin","Nummularine A","Camellidin I","(3S,5R,6S,7E,9x)-7-Megastigmene-3,6,9-triol 9-glucoside","Ketodeoxyoctonic acid","Cyanidin 3-glucoside","Liquiritin","Lpa(16:0)","Kaempferitrin","6''-O-Acetylholocalin","Tyrosol 4-sulfate","1,2-Dichloroethane","CDP-DG(PGJ2/i-18:0)","Hynapene A","12,13-DiHOME","Homogentisic acid","Pe(17:0/0:0)","Ganosporeric acid A","CDP-DG(TXB2/i-15:0)","CDP-DG(PGD1/a-15:0)","Midazolam","(4S,6S)-3,4,5,6-Tetrahydro-4-hydroxy-6-methyl-2H-pyran-2-one","Limocitrin 3-rutinoside","Ryanodine","Eriodictyol 5,3'-di-O-glucoside","Ginsenoside Rd","Auraptene","Phosphinomethylisomalate","2'-Deoxyguanosine 5'-monophosphate","L-2-Hydroxyphytanate","Kaempferide","Lincomycine","6-C-alpha-L-Arabinopyranosyl-8-C-beta-L-arabinopyranosylapigenin","Asp-Leu-Ile","Leonuriside A","PGP(6 keto-PGF1alpha/20:3(8Z,11Z,14Z))","Ascaroside C6","Kudzusaponin SA3","Kudzusaponin SA2","Candoxatrilat","Phloretin","Cortexolone","Kudzusaponin SA1","Asparagoside F","L-olivosyl-erythronolide B","5-Heptyltetrahydro-2-oxo-3-furancarboxylic acid","Triethylene glycol diglycidyl ether","Kaempferol 3-(6''-acetylglucoside)-7-glucoside","DG(PGE2/i-13:0/0:0)","L-2-Amino-3-(1-pyrazolyl)propanoic acid","CDP-DG(PGF2alpha/a-15:0)","CDP-DG(PGF1alpha/a-15:0)","2-Methoxyhexadecanoic acid","(E)-Resveratrol 3-glucoside 4'-sulfate","Leu-Glu-Asp","Gly-Arg-Leu","DG(PGF2alpha/0:0/a-13:0)","Myristoyl-Gly-OH","Ser-His","P-toluenesulfonic acid","(r)-2-hydroxystearic acid","Suberic acid","2-hydroxyhexadecanoic acid","9(s)-hode","Convalloside","L-Ascorbic acid-2-glucoside","Loganate","Sandosaponin B","Isosakuranetin-7-o-neohesperidoside","PI(5-iso PGF2VI/22:6(4Z,7Z,10Z,13Z,16Z,19Z))","Kessyl glycol","Lacosamide-glucuronide","Pimelic acid","Val-Arg-Pro","CDP-DG(PGJ2/a-17:0)","Phe-Gly-Tyr","Verbasoside","Notoginsenoside G","Chinenoside II","Glu-Glu-Ile","Albendazole S-oxide","1-palmitoyl-dihydroxyacetone-phosphate","Pimelea factor P2","Auberganol","PIP(PGF1alpha/18:0)","3,8-Dihydroxy-1-methylanthraquinone-2-carboxylic acid","Cyanidin 3-sambubioside","CDP-DG(PGE2/a-15:0)","CDP-DG(PGD2/i-15:0)","Pectolinarigenin 7-rhamnoside","Sterebin D","Porphyrin-5,15-diol","Naringenin 7-rhamnoglucoside","(3beta,5beta,8beta,22E,24xi)-Ergosta-6,22-diene-3,5,8-triol","Ser-Gln-Leu-Lys","Clofazimine glucuronide","Tomatine","PA(6 keto-PGF1alpha/18:4(6Z,9Z,12Z,15Z))","Lavandulifolioside","CDP-ethanolamine","Chaulmoogric acid","Delphinidin 3-caffeoylglucoside","5,7-Dihydroxy-4H-1-benzopyran-4-one","Pterin","Rhamnazin 3-sophoroside","Patuletin 3-(2''-apiosyl-[2'''-feruloylgentiobioside])","Ginsenoside rg1","Tyr-Asp-Met","Ser-Val-Leu","Quercetin 3-[rhamnosyl-(1->2)-rhamnosyl-(1->6)-glucoside]","PE-Cer(17:2_2O/18:0_O)","Lpi(22:1)","Glu-Asn","Sedanonic acid","Apigenin 7-O-(6''-malonyl-apiosyl-glucoside)","Butyl (s)-3-hydroxybutyrate glucoside","Melleolide M","Canavanine","Ile-Val-Ile","Ser-Leu-Pro","PIP(5-iso PGF2VI/20:4(8Z,11Z,14Z,17Z))","Tuberoside B (Ullucus tuberosus)","Thr-Ile-Ile","Ethyl 2-aminobenzoate","Bhas#26","2-amino-3-methylsuccinic acid","6-deoxoteasterone","Hexyl beta-D-glucopyranoside","Dlcl(20:3/20:5)","Delphinidin 3-(3''-p-coumaroylglucoside)","Cubebin","Scorzoside","PIP(PGF2alpha/20:4(8Z,11Z,14Z,17Z))","CDP-DG(PGF2alpha/20:1(11Z))","Grossamide","DG(PGE2/i-14:0/0:0)","Trp-Lys","Tricalysioside T","Progesterone","3-Hydroxycarbamazepine","Glu-Pro","Gallicynoic acid F","Hemiariensin","N-Carboxyacetyl-D-phenylalanine","3,3'-Dithiobis[2-methylfuran]","Dlcl(14:0/14:1)","Lys-Gln-Asn","DG(PGF1alpha/0:0/2:0)","Flumethasone","Uridine 3'-monophosphate","Dihydrofolic acid","Ptd(S)Ins-(3,4)-P2 (1,2-dioctanoyl)","PI(6 keto-PGF1alpha/22:4(10Z,13Z,16Z,19Z))","N-[1H-Indol-3-YL-acetyl]glycine acid","5-Hydroxytryptophan","Arg-Lys-Cys-Gly","Sherry lactone","Phe-Trp","PIP(5-iso PGF2VI/20:4(5Z,8Z,11Z,14Z))","PIP(PGF1alpha/20:4(5Z,8Z,11Z,14Z))","2''-O-Acetylisoorientin","Graecunin D","Dolichosterone","Lepidiumterpenoid","Glu-Ile-Ile","PIP(PGF1alpha/16:1(9Z))","Gibberellin A14","Cepharanthine","Gamma-Glutamyl-S-(1-propenyl)cysteine sulfoxide","L-Citronellol glucoside","CDP-DG(PGF1alpha/16:0)","Oleuropein","Formycin b","Kaempferol 7-o-glucoside","Eremopetasitenin D2","Tuliposide B","6'-hmg sdg","Ricinoleic acid","Nevskin","CDP-DG(PGE1/a-15:0)","Gly-Val-Leu","Azukisaponin VI","Pe(18:3/0:0)","Withaperuvin D","PIP(5-iso PGF2VI/20:1(11Z))","(-)-Epigallocatechin 3-cinnamate","Diosmetin-7-o-neohesperidoside","Phosphate","Tyr-Leu-Tyr-Glu-Ile-Ala-Arg","Solacauline","Fortunolide B","Alpha-Pyrufuran","Ala-Leu-Leu-Ser","L-N-(1H-Indol-3-ylacetyl)aspartic acid","CDP-DG(PGJ2/i-22:0)","2-Methoxyoctadecanoic acid","(z)-3-Hexenyl Beta-d-Glucopyranoside","Leu-Gln-Leu","Deoxyuridine","Capsianoside I","Araliasaponin III","4-Hydroxybenzoyl glucose","Methyl 1-methoxy-1H-indole-3-carboxylate","Beta-D-Glucosyloxydestruxin B","Estrone glucuronide","3-Oxohexanoic acid","Naringenin 7-rutinoside","Macrophorin C","CDP-DG(PGF2alpha/i-15:0)","Ala-Ile","Cannabidiolic acid","Ala-Gln-Tyr","(R)-2-(n-Propyl)-malate","Hypoglycin B","Deltoside","Glucoraphenin","(+/-)12,13-DiHOME","(S)-9-Hydroxy-10-undecenoic acid","Alpha-Linolenic acid","Sl(10:0_o/14:0_o)","4-hydroxybenzaldehyde","9,10-Dihydroxystearic acid","Dolichyl b-D-glucosyl phosphate","Furomammea D","Pi(22:6/22:6)","(all-Z)-8,11,14-Heptadecatrienal","Casuarine 6-alpha-D-glucoside","CDP-DG(6 keto-PGF1alpha/18:2(9Z,12Z))","Ceanothine E","PA(6 keto-PGF1alpha/2:0)","Sepiapterin","12S,13S-Epoxy-9S-hydroxy-10E,15Z-octadecadienoic acid","Trp-Ile-His","DG(PGF2alpha/0:0/13:0)","Chlorophyllide a","Ganoderic acid Mk","(+)-Syringaresinol O-beta-D-glucoside","Amarogentin","5-Hydroxytryptophol glucuronide","Kanokoside A","Linarin","9-F1-phytoprostane","Artomunoxanthentrione","Phenylglucuronide","Diosmetin 7-O-beta-D-glucuronopyranoside","(4S,8R)-8,9-Dihydroxy-p-menth-1(6)-en-2-one","Thr-Ile","2-Hydroxybenzaldehyde O-[xylosyl-(1->6)-glucoside]","Ergosine","4'-Methylliquiritigenin 7-rhamnoside","6-Thioguanosine monophosphate","Lucuminic acid","Ribostamycin","Val-Thr-Asn","N-Glycolyl-D-glucosamine","Hesperetin 7-glucoside","Cassiaside B2","(S)-5'-Deoxy-5'-(methylsulfinyl)adenosine","Shanzhiside","Elatoside I","Elatoside K","PIP(6 keto-PGF1alpha/20:3(5Z,8Z,11Z))","3-Methoxytyramine-betaxanthin","Amaranthussaponin III","2-O-(alpha-D-Mannosyl)-D-glycerate","Gibberellin A32","Nicotinuric acid","Mangostanol","(1S,2S,4S,5S)-2,4,7-Thujanetriol 4-glucoside","Kanzonol N","Madecassoside","(9Z)-3-Hydroxydodecenoylcarnitine","Arg-Ala-Ile","CDP-DG(PGJ2/i-19:0)","Gartanin","Putaminoxin E","Icariside B8","Centellasaponin C","Ganoderiol I","5-Aminovaleric Acid","3-Amino-3-(4-hydroxyphenyl)propanoate","10-Hydroxymelleolide","Acetylleucine","Pangamic acid","CDP-DG(5-iso PGF2VI/20:4(5Z,8Z,11Z,14Z))","2-(Acetylamino)-2-deoxy-alpha-D-mannopyranose","PGP(6 keto-PGF1alpha/20:3(5Z,8Z,11Z))","4-O-Caffeoyl-3-O-feruloylquinic acid","Geniposidic acid","Pentyl glucosinolate","DG(5-iso PGF2VI/0:0/2:0)","Sebacic acid","Chikusetsusaponin iv","3',4',5'-Trimethoxytricetin 7-[rhamnosyl-(1->6)-glucoside]","Mappain","DG(PGE1/i-13:0/0:0)","Chloriolide","Ps(2:0/16:2)","Arg-Gly-Asp","Anacardic acid","Icariside E5","Annosquamosin A","10-hydroxy-2e-decenoic acid","Microcystin LW","AzIV","4-Hydroxycinnamoylagmatine","Amaranthussaponin II","Chymosin preparation, escherichia coli k-12","Scopolamine","Dodecanedioic acid","PIP(PGF1alpha/20:1(11Z))","Tauroursocholic acid","Lappaol A","Lappaol B","Valechlorin","Deoxyguanosine","9,12,13-Todea","PIP(5-iso PGF2VI/22:5(7Z,10Z,13Z,16Z,19Z))","N-Decanoylglycine","(+/-)-Pelletierine","Asp-Asp-Asp-Asp-Lys","13-Hydroxydocosanoic acid","Thymidine","Oroxylin A","3-Hydroxysebacic acid","DG(5-iso PGF2VI/i-13:0/0:0)","Indole-3-acetamide","Methylmalonic acid","CDP-DG(LTE4/i-13:0)","Isobrucein A","Soyasaponin aa","Ipomeatetrahydrofuran","3-Oxododecanoic acid","CDP-DG(PGF1alpha/i-14:0)","CDP-DG(PGE1/i-15:0)","Nodularin","18-Hydroxycorticosterone","Lpc(18:2)","Oleoside dimethyl ester","12-Hydroxyjasmonic acid glucoside","Mammea B/BC cyclo E","Soyasaponin ba","Formononetin 7-(2-p-hydroxybenzoylglucoside)","12S-HHTrE","Soyasaponin bb","Traumatin","Gln-Val-Ile","Oxypurinol","Yangonin","4'-O-methyl-(-)-epicatechin-5-O-beta-glucuronide","CDP-DG(TXB2/a-15:0)","Ieodomycin C","Derriscanoside A","Withaphysacarpin","Quercetin 3-(2Gal-apiosylrobinobioside)","2-Methylcitrate","(4E,15Z)-Bilirubin","Cincassiol B","Puerarin","Soyasaponin III","PIP(5-iso PGF2VI/16:0)","Patientoside A","Azelaic acid","9,10-Epoxystearic acid","Congmunoside XV","Khelmarin D","Fuscaxanthone A","Aloe-emodin","Hyacinthin","(6beta,7alpha,12beta,13beta)-7-Hydroxy-11,16-dioxo-8,14-apianadien-22,6-olide","PGP(6 keto-PGF1alpha/20:4(8Z,11Z,14Z,17Z))","Decarbamoylsaxitoxin","10-Oxo-11-octadecen-13-olide","Melongoside K","Kaempferol 3-O-rhamnosyl-rhamnosyl-glucoside","Medicoside J","Leptophylloside","Lpc(18:0)","9-beta-d-Arabinofuranosylguanine","9-Peroxy-5,6E-dehydro-6,7-dihydrogeranyl acetate","28-Glucuronyloleanolic acid 3-[galactosyl-(1->3)-glucoside]","Lepidimoic acid","(+)-Mahanimbine","Tobramycin","7,8-dihydromonapterin","Sinapoylspermine","Asiaticoside","(24E)-3alpha-Acetoxy-15alpha-hydroxy-23-oxo-7,9(11),24-lanostatrien-26-oic acid"],"additional_accession":[]},"is_claimable":false,"name":"Integrative transcriptomic, metabolomic, and physiological analyses reveal the root adaptive mechanisms of common vetch (Vicia sativa L.) under drought stress","description":"Drought is a major abiotic stress that limits the productivity and ecological adaptability of leguminous forage crops. As the primary organs that sense soil water deficits, roots play an essential role in plant adaptation to drought. Common vetch (Vicia sativa L.) is an important annual leguminous forage crop widely used for forage production, green manure, and ecological restoration. However, the molecular mechanisms underlying cultivar-specific root responses to drought stress remain poorly understood. In this study, integrated transcriptomic (RNA sequencing, RNA-seq) and widely targeted metabolomic (liquid chromatography-mass spectrometry, LC-MS) analyses were conducted to systematically characterize drought-responsive mechanisms in the roots of a drought-tolerant cultivar LuQuan common vetch(LQ) and a drought-sensitive cultivar LanJian NO.1(LJ). LQ exhibited greater drought tolerance than LJ, accompanied by more effective transcriptional regulation and metabolic reprogramming under drought stress. Compared with LJ, LQ showed marked activation of flavonoid biosynthesis, leading to the substantial accumulation of antioxidant metabolites, including kaempferol, luteolin, galangin, isoliquiritigenin, and phloretin. Enhanced α-linolenic acid metabolism also contributed to the maintenance of membrane lipid homeostasis and the regulation of stress signaling. Furthermore, weighted gene co-expression network analysis (WGCNA) combined with transcriptome–metabolome association analysis identified multiple hub genes associated with flavonoid metabolism, lipid oxidative metabolism, and antioxidant enzyme activities. These genes were strongly correlated with key metabolites and the activities of peroxidase (POD), superoxide dismutase (SOD), and catalase (CAT), forming a tightly interconnected regulatory network. These findings suggest that the drought-tolerant cultivar LQ improves drought adaptation through a coordinated regulatory network integrating flavonoid metabolism, lipid metabolism, and antioxidant enzyme activity, thereby maintaining redox homeostasis in roots under drought stress. This study identifies flavonoid metabolism as a central link between lipid metabolic remodeling and antioxidant defense and provides insight into the molecular basis of drought tolerance. It also identifies candidate genes for developing improved drought-resistant germplasm.","dates":{"publication":"2026-07-27","submission":"2026-07-27"},"accession":"MTBLS15164","cross_references":{"HMDB":["HMDB0001432","HMDB0000070;HMDB0000716;HMDB0000070","HMDB0000719","HMDB0001325;PW_C001022","HMDB0000097;PW_C000065","HMDB0001842","HMDB0000177;PW_C000116","HMDB0000517","HMDB0304236","HMDB0000043;PW_C000030","HMDB0000086","HMDB0001565","HMDB0003681","HMDB0000168;PW_C000110","HMDB0040737","HMDB0000055;HMDB0242553;HMDB0246552","HMDB0060665","HMDB0028817","HMDB0034073","HMDB0246884","HMDB0304227","HMDB0003453","HMDB0030743","HMDB0031641","HMDB0006809","HMDB0003344","HMDB0254530","HMDB0000630","HMDB0001488;PW_C001145","HMDB0000157;PW_C000102","HMDB0002331","HMDB0000905;PW_C000724","HMDB0039948","HMDB0304810","HMDB0000292;PW_C000198","HMDB0001934;HMDB0243542;PW_C008731","HMDB0003357","HMDB0002894","HMDB0014638","HMDB0003540","HMDB0006050","HMDB0001416","HMDB0000125","HMDB0028925","HMDB0015303","HMDB0028934","HMDB0031700","HMDB0034235","HMDB0029126","HMDB0006900","HMDB0060485","HMDB0000172;PW_C000112","HMDB0302754","HMDB0012130","HMDB0000735","HMDB0029016","HMDB0038265","HMDB0006548","HMDB0029135","HMDB0004044","HMDB0038960","HMDB0035221","HMDB0000159;PW_C000104","HMDB0011172","HMDB0302470","HMDB0000403","HMDB0028916","HMDB0001545;PW_C001188","HMDB0031544","HMDB0028905","HMDB0004326","HMDB0004220","HMDB0012197","HMDB0028987","HMDB0011166","HMDB0060681","HMDB0036089;LMPR0102090020","HMDB0028929","HMDB0028823","HMDB0030295","HMDB0001868","HMDB0029118","HMDB0000972","HMDB0029004","HMDB0004824","HMDB0028922","HMDB0032972","HMDB0036631","HMDB0036978","HMDB0028822","HMDB0000197","HMDB0028733","HMDB0253022","HMDB0033909","HMDB0001562;HMDB0247218;HMDB0001562","HMDB0003323","HMDB0033731","HMDB0033115","HMDB0244231","HMDB0036584","HMDB0000754","HMDB0036143","HMDB0031769;HMDB0035031;HMDB0031769","HMDB0254761","HMDB0035734","HMDB0028928","HMDB0006083","HMDB0036621","HMDB0000500;PW_C000382","HMDB0030388","HMDB0302904","HMDB0039976","HMDB0029156","HMDB0033138","HMDB0034335","HMDB0029134","HMDB0036523","HMDB0041048","HMDB0028933","HMDB0033198","HMDB0000402","HMDB0028830","HMDB0000745","HMDB0250275","HMDB0255213","HMDB0030803;LMPK12110260","HMDB0004089","HMDB0303040","HMDB0034214","HMDB0039934","HMDB0041416","HMDB0033991;HMDB0247842;LMPK12050013","HMDB0028723","HMDB0036665","HMDB0005801;HMDB0032008;LMPK12110003","HMDB0037977;LMPK12010095","HMDB0037461","HMDB0038767;LMPK12111750","HMDB0015090;PW_C009396","HMDB0035865","HMDB0038820;LMPK12110589","HMDB0030884","HMDB0037467","HMDB0030669","HMDB0013302","HMDB0037340;LMPK12110336","HMDB0036861","HMDB0014700","HMDB0038102","HMDB0014438","HMDB0029699","HMDB0029086","HMDB0041513","HMDB0240477","HMDB0304788","HMDB0039376","HMDB0039247","HMDB0302534;HMDB0255521;LMPK12140359","HMDB0029090","HMDB0034983","HMDB0029353","HMDB0033656","HMDB0278344","HMDB0029856","HMDB0033751;HMDB0257017;LMPK12112171","HMDB0254199","HMDB0040215","HMDB0030172","HMDB0041427","HMDB0003441","HMDB0303206;HMDB0059838","HMDB0302720;HMDB0034277","HMDB0028739","HMDB0033192","HMDB0304068","HMDB0041364","HMDB0035116","HMDB0030157","HMDB0030002","HMDB0029819","HMDB0034045","HMDB0041459","HMDB0036634","HMDB0029388","HMDB0013692;HMDB0252297","HMDB0032105","HMDB0031401","HMDB0003634","HMDB0030150","HMDB0032622","HMDB0029564","HMDB0250398","HMDB0253731","HMDB0242175","HMDB0032082","HMDB0036189","HMDB0030544","HMDB0032797;LMFA02020001","HMDB0038736","HMDB0304731","HMDB0003667","HMDB0035158","HMDB0037013","HMDB0040711","HMDB0003581","HMDB0035772","HMDB0036014","HMDB0029758","HMDB0032958","HMDB0030766","HMDB0302593","HMDB0036100","HMDB0000482","HMDB0032590","HMDB0032990","HMDB0259891;LMPK12090046","HMDB0035828","HMDB0033242","HMDB0031197","HMDB0259787","HMDB0036489","HMDB0001954","HMDB0258957","HMDB0036992","HMDB0040583","HMDB0036214","HMDB0029676;LMPK12110824","HMDB0304799","HMDB0033207","HMDB0029841","HMDB0038506","HMDB0041134","HMDB0002214","HMDB0029937","HMDB0038758","HMDB0038346","HMDB0040900","HMDB0302700","HMDB0041049","HMDB0036816","HMDB0039358","HMDB0250454","HMDB0290964","HMDB0035011","HMDB0034240","HMDB0037104","HMDB0040210","HMDB0035841","HMDB0249812","HMDB0035157","HMDB0040899","HMDB0035737","HMDB0302409","HMDB0279446","HMDB0036094","HMDB0030727","HMDB0094711","HMDB0030995;LMFA10000001","HMDB0036787","HMDB0033016","HMDB0040120","HMDB0036064","HMDB0041529","HMDB0030801","HMDB0004649","HMDB0004586","HMDB0035875","HMDB0036847","HMDB0032602","HMDB0059883","HMDB0037065","HMDB0006528","HMDB0041102","HMDB0040810","HMDB0254405","HMDB0039515","HMDB0035481","HMDB0253180","HMDB0294322","HMDB0252684;LMPK12111018","HMDB0041404","HMDB0279483","HMDB0242181;LMSP01040008","HMDB0031357","HMDB0242746","HMDB0033640","HMDB0035314","HMDB0038612","HMDB0034062","HMDB0006547;LMFA01030357;PW_C002804","HMDB0040462","HMDB0039064","HMDB0030144","HMDB0245413","HMDB0035155;HMDB0005812","HMDB0036362","HMDB0038483","HMDB0035811","HMDB0274570","HMDB0036993","HMDB0060435","HMDB0031049","HMDB0034064","HMDB0002364;LMPR0106150004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