Metabolite annotation was performed within Progenesis QI by matching MS and MS/MS spectra against public databases including HMDB, METLIN, together with an in-house metabolite database. The mass error tolerance for precursor ions was set below 10 ppm. Metabolites were annotated based on MS-MS/MS spectral matching scores.
"],"repository":["MetaboLights"],"study_status":["Public"],"ptm_modification":[""],"instrument_platform":["Liquid Chromatography MS - negative - reverse-phase","Liquid Chromatography MS - positive - reverse-phase"],"chromatography_protocol":["LC separation was performed on a Thermo Scientific Vanquish UHPLC system. The analytical column was ACQUITY UPLC HSS T3 (100 mm × 2.1 mm i.d., 1.8 µm; Waters, Milford, USA). Mobile phase A consisted of 95% water and 5% acetonitrile with 0.1% formic acid. Mobile phase B consisted of 47.5% acetonitrile, 47.5% 2-propanol and 5% water with 0.1% formic acid. The injection volume was 3 μL, and column temperature was maintained at 40 °C.
"],"publication":["Metabolic Reprogramming at the A. muelleri–Ar Infection Site."],"submitter_affiliation":["Kunming University"],"submitter_name":["Qixiang Wu"],"organism_part":["petiole"],"technology_type":["mass spectrometry assay"],"disease":[""],"extraction_protocol":["Accurately weigh 50 ± 5 mg sample into a 2 mL centrifuge tube, add one 6-mm-diameter grinding bead. Add 400 μL extraction solution (methanol:water = 4:1, v:v), containing four internal standards including L-2-chlorophenylalanine (0.02 mg/mL). Samples were ground for 6 min at −10 °C, 50 Hz using a cryogenic tissue grinder, followed by low-temperature ultrasonic extraction for 30 min at 5 °C, 40 KHz. Samples were incubated at −20 °C for 30 min, then centrifuged at 13000 g for 15 min at 4 °C. The supernatant was transferred into an LC-MS vial with insert for instrumental analysis. Quality control (QC) samples were prepared by pooling 20 μL supernatant from each individual sample.
"],"organism":["Amorphophallus muelleri"],"full_dataset_link":["https://www.ebi.ac.uk/metabolights/MTBLS15728"],"author":["Penghua Gao. Kunming University. Kunming University, No.2, Puxin Road, Guandu District, Kunming, Yunnan 650214, China. 786987934@qq.com."],"data_transformation_protocol":["Raw LC-MS data were processed using Progenesis QI software (Waters Corporation, Milford, USA). Data processing steps included baseline filtering, peak picking, peak integration, retention-time correction and peak alignment. A feature matrix containing retention time, m/z value and peak intensity was generated for subsequent analysis.
"],"study_factor":["Infection time"],"submitter_email":["3283687575@qq.com"],"sample_collection_protocol":["Three-month-old healthy Amorphophallus bulbifer seedlings were used in this experiment. For artificial inoculation, uniform wounds were cut at the base of each petiole with a sterile scalpel. Mycelial discs (0.5 × 0.5 cm) of Sclerotium rolfsii cultured for three days were placed with the mycelium side facing the wound. Sterile PDA discs were applied to the control group. Inoculated tissues were harvested at 0, 1, 3, and 6 days post inoculation. All collected samples were immediately frozen in liquid nitrogen and stored at −80 °C for subsequent analysis.
"],"omics_type":["Metabolomics"],"study_design":["Thermo Scientific Vanquish UHPLC System","Amorphophallus muelleri","Plant Pathology","host-pathogen interaction","Metabolomics","untargeted analysis","Thermo Scientific Q Exactive HF-X","petiole","untargeted metabolite profiling"],"curator_keywords":["Thermo Scientific Vanquish UHPLC System","Amorphophallus muelleri","Plant Pathology","host-pathogen interaction","Metabolomics","untargeted analysis","Thermo Scientific Q Exactive HF-X","petiole","untargeted metabolite profiling"],"mass_spectrometry_protocol":["Mass spectrometry detection was performed on a Thermo Q-Exactive HF-X mass spectrometer with electrospray ionization (ESI). Both positive and negative ion modes were acquired. The full-scan m/z range was set to 70-1050. Sheath gas flow rate was 50 arb, auxiliary gas flow rate was 13 arb. Heater temperature was 425 °C, capillary temperature was 325 °C. Spray voltage was set to 3500 V for positive mode and −3500 V for negative mode. S-Lens RF Level was 50. Normalized collision energy was 20, 40, 60 eV. The resolution for Full MS was 60000, and MS/MS resolution was 7500. Pooled QC samples were injected every 5-15 analytical samples for system stability evaluation.
"],"metabolite_name":["Luteolin-6-C-Glucoside","Phaseolic acid","Naringenin","1-Linoleoyl-sn-Glycero-3-Phosphocholine","Schaftoside","Inosine pyruvate","Deoxyribose","Tetranor 12-HETE","PG(16:0/0:0)[U]","Alcesefoliside","P-CHLOROPHENYLALANINE","2-(4-Chlorophenoxy)propionic acid","1-O-Caffeoyl-beta-D-glucose","N1,N10-Dicoumaroylspermidine","Citramalic Acid","LysoPA(16:0/0:0)","Kaempferol-3-O-Glucoside","Dehydroxymethylepoxyquinomicin","L-Threonine","Pentose","Mesaconic Acid","Caffeic Acid","Alpha-D-Galactopyranuronosyl-(1->4)-alpha-D-galactopyranuronosyl-(1->4)-D-galacturonic acid","8-Amino-7-oxononanoic acid","L-Histidine","9,10-Epoxyoctadecanoic acid","5-phosphonooxy-L-lysine","Cis-Caftaric acid","PC(17:2(9Z,12Z)/0:0)","Ethyl Myristate","Castanospermine","Kaempferol 3-O-beta-robinoside 7-O-alpha-L-rhamnopyranoside","4-(undecan-5-yl)benzene-1-Sulfonic Acid","Oxoglutaric acid","5-O-Methylembelin","2,6-Dimethoxyphenol","Demissidine","Capric acid","Alloxan","N6-(delta2-isopentenyl)-adenosine 5'-diphosphate","Ribonic acid","7-Aminocephalosporanic acid","N-Ethylglycine","(S)-Isocorydine","L-Epicatechol","Chrysophanein","2-O-beta-D-Glucopyranuronosyl-D-mannose","9(S)-HpODE","4-Methylbenzoic Acid","LysoPA(18:2(9Z,12Z)/0:0)","DL-Methionine sulfone","Gingerglycolipid C","12-OPDA","Prostaglandin E2","Gingerglycolipid A","Methoxsalen","N-[(2R)-6,7-Dihydroxy-3-oxo-1-sulfanylheptan-2-yl]acetamide","N2-Succinyl-L-ornithine","Phthalic Acid","L-Asparagine","N6-Acetyl-L-lysine","(+/-)-Tryptophan","Gentisic acid","Phosphate","Lampranthin II","9,10,13-TriHOME","DL-Glycerol 1-phosphate","Kaempferide 3-glucoside-7-rhamnoside","DG(18:2(9Z,12Z)/22:6(4Z,7Z,10Z,13Z,16Z,19Z)/0:0)","4-Methylcatechol","12,13-DHOME","3-Aminopentanedioic Acid","Isoferulic Acid","3,5-Dimethyl-3'-isopropyl-L-thyronine","9(S)-HpOTrE","Dopamine","Galactonolactone","Prunin 6''-O-gallate","(S)-3-Sulfonatolactate","Astilbin","9(S)-HOTrE","Cystathione","LysoPE(0:0/22:2(13Z,16Z))","3-Oxoadipic acid","Pretyrosine","2,3-Dihydro-2,3-dihydroxy-4-(4-hydroxyphenyl)-1H-phenalen-1-one","2(R)-hydroxyicosanoic acid","Beta-Alanine","Valylisoleucine","Hydroxychlor","PE(16:0/0:0)","2-O-(6-Phospho-alpha-mannosyl)-D-glycerate","Acetylhomoserine","Isocitric Acid","Cuminaldehyde","Daucic acid","Keto-3-deoxy-D-manno-octulosonic acid","Triethylene glycol bis(3-tert-butyl-4-hydroxy-5-methylphenyl)propionate","Guanosine","11b,17a,21-Trihydroxypreg-nenolone","2-Hydroxybutyric Acid","PE(18:1/0:0)","L-Glutamic Acid","2-Decyl-3-Hydroxypentanedioic Acid","3-Methyluridine","Scolymoside","Citric Acid","5-(Methoxycarbonyl)thiophene-2-carboxylic acid","3-Phenyl-2-thioxoimidazolidin-4-one","Glyceric Acid","Adipic Acid","Uridine-5'-Monophosphate","3-Hydroxybenzoic Acid","2-keto-D-Gluconic acid","Stizolamine","Ginnalin B","Oxalic acid","Pyrophosphate","Uridine","Hypoxanthine","3-(Methylthio)-1-propanol","Gluconolactone","(+)-Syringaresinol O-beta-D-glucoside","Dinoterb","4-Dodecylbenzenesulfonic acid","Trehalose 6-Phosphate","1-O-Caffeoylglucose","Androsterone glucuronide","Trachelogenin","Hydroxypropionic Acid","SA-beta-Gal","Neocarlinoside","Isopropyl apiosylglucoside","Carboprost methyl","Apremilast","D-altro-D-manno-Heptose","UDP-D-Galactose","Multiflorin B","Gamma-Glu-leu","Plantaginin","Adenine","7-Hydroxy-6-methyl-8-ribityl lumazine","Glycerophosphoinositol","3-Cyano-L-alanine","Oxoadipic acid","Patulin","ADP Ribose","Aromadendrin 3,7-diglucoside","1,1'-[1,13-Tridecanediylbis(oxy)]bisbenzene","L-Tyrosine","D-Glucosamine-6-phosphate","Alpha-Tocopherol acetate","Pachymic acid","Uric Acid","Linoleic Acid","Apigenin 7-O-beta-D-rutinoside","Inosine","L-Serine","Sulfoacetic acid","Uridine monophosphate (UMP)","Chlorocitric acid","L-Phenylalanine","Camellianin A","13-Hode","Sinapyl aldehyde","Fructose-6-phosphate lactate","4-Methylumbelliferyl acetate","2,3-dinor Prostaglandin E1","Leonuriside A","Trans-Aconitic Acid","Tri-glyceride","5-Aminovaleric Acid","Saccharopine","Acetyl-DL-Leucine","2-Aminoacrylic acid","Oripavine","2,5-Dioxopentanoate","Dopaxanthin quinone","(2S)-6-Amino-2-(hexanoylamino)hexanoic Acid","D-Glycero-D-galacto-heptitol","2-Dodecylbenzenesulfonic acid","LysoPC(18:1(11Z)/0:0)","3b-Allotetrahydrocortisol","2-Pyrocatechuic Acid","Ureidoisobutyric acid","Trypanothione","Butofilolol","2-Amino-9-[2-(phosphanylmethoxy)ethyl]-1H-purin-6-one","L-Cystathionine","4-ene-Valproic acid","Taxifolin-3-Glucoside","2-Hydroxystearic acid","Diospyrin","4-Vinylphenol","N-Acetyl-D-Glucosamine 6-Phosphate","Theophylline","PE(20:1/0:0)","Tolmetin","D-Malic acid","GPA(18:2/17:0)","Propranolol glucuronide","Trehalose","D-Gal alpha 1->6D-Gal alpha 1->6D-Glucose","1-(2-Methoxy-3,4-methylenedioxyphenyl)-1-propanone","Leucyl-leucine","Arasc","2-Isopropylmalic Acid","Phellopterin","6-O-(6-Deoxy-alpha-L-mannopyranosyl)-beta-D-glucopyranose","4-Nitrophenol","Protocatechuic Acid","Aldobiouronic acid D3","Prunasin","3-Coumaric Acid","Propionic Acid","Luteolin","D-Galactose","Isovitexin 2''-O-arabinoside","4-Hydroxybenzoic Acid","BOLDINE","6-(4-carboxy-2,6-dihydroxyphenoxy)-3,4,5-trihydroxyoxane-2-carboxylic acid","Poppy acid","2,3-Dihydroxycarbamazepine","Xanthosine","9-Hydroxy-10,12-Octadecadienoic Acid","Abscisic Acid","9'-Carboxy-gamma-chromanol","Acacetin 7-[apiosyl(1->6)-glucoside]","Xanthine","6-Phosphogluconic acid","Alpha-D-Glucose 1,6-Bisphosphate","Fructose 6-phosphate","Deoxyguanosine","N-Acetyl-L-Glutamic Acid","Glycyl-leucine","Cibaric acid","Fipronil","4alpha-carboxy-stigmasta-7,24(241)-dien-3beta-ol","Isorhamnetin 3-O-[b-D-glucopyranosyl-(1->2)-[a-L-rhamnopyranosyl-(1->6)]-b-D-glucopyranoside]","Dodecylbenzenesulfonic Acid","L-Ascorbic acid 2-glucoside","3-(3,4-Dihydroxyphenyl)lactic acid","Glucodistylin","Vitexin","Gluconic Acid","DG(18:1(9Z)-O(12,13)/0:0/2:0)","Glycerophosphoric acid","Malic acid","8-Hydroxyguanine","2-(Phosphonomethyl)pentanedioic acid","(2S,3S)-N-(2-Methoxy-5-(trifluoromethoxy)benzyl)-2-phenylpiperidin-3-amine","Neoisoastilbin","Sn-glycero-3-Phosphoethanolamine","18-HEPE","PE(18:2/0:0)","Beta-Tyrosine","Citroside A","Chloramphenicol","Erythronolactone","Norethisterone enanthate","Cis-Coutaric acid","2-Mercaptobenzothiazole","Fasoracetam","Isocitrate","N5-Acetyl-N2-gamma-L-glutamyl-L-ornithine","3'-Hydroxystanozolol","Galactosylglycerol","PE(18:3/0:0)","1-O-Sinapoyl-Beta-D-Glucose","N-(3-(Dimethylamino)propyl)acrylamide","Alpha-Methyl-m-tyrosine","N-Trans-Feruloyltyramine","Maleamic Acid","Epicatechin-(2beta->7,4beta->8)-epicatechin-(4beta->8)-epicatechin","Phe-Phe-Pro-Arg","Phenylpyruvic Acid","2-(3-(2-Aminoethyl)-1h-indol-5-yloxy)acetyl-l-tyrosyl-glycinamide","Lactobionic acid","Pyridine N-oxide glucuronide","Pradofloxacin","3-Methyl-2-Oxovaleric Acid","Azelaic Acid","Traumatic Acid","Cinnamtannin B2","Dethiobiotin","Vicenin 2","4-Hydroxy-2-oxoglutaric acid","Glycerylphosphorylcholine","2-Amino-4-[carbamimidoyl(methyl)amino]butanoic acid","13(S)-HODE","D-Digitoxose","D-Galactaric acid","D-Mannose 6-Phosphate","LysoPS(18:2(9Z,12Z)/0:0)","Kaempferol 3-O-glucosyl-rhamnosyl-glucoside","Succimer"],"additional_accession":[]},"is_claimable":false,"name":"Metabolic Reprogramming at the A. muelleri–Ar Infection Site","description":"Metabolomic changes were investigated at the infection site of A. muelleri challenged with Ar. Untargeted LC-MS metabolomics was used to profile metabolite variations between control and infected samples, together with QC samples for quality control. Differential metabolites were characterized to reveal metabolic reprogramming during host-pathogen interaction.
","dates":{"publication":"2026-09-18","submission":"2026-09-18"},"accession":"MTBLS15728","cross_references":{"HMDB":["HMDB0302583;HMDB0029484;LMPK12110217","HMDB0034571","HMDB0251128","HMDB0030843;HMDB0035464;LMPK12110337","HMDB0301981;LMPK12110469;HMDB0253666","HMDB0253708;LMPK12110338;MJDBOTE0000242","HMDB0245791","HMDB0303149;HMDB0038848","HMDB0062562;PW_C000205;HMDB0000301","HMDB0302583","HMDB0002362;HMDB0006284","HMDB0000291;HMDB0254548;HMDB0304531;PW_C000197","HMDB0246788","HMDB0037371","HMDB0301916;HMDB0258553","HMDB0000064;PW_C000046;MJDBOTE0000560","HMDB0039379","HMDB0251528;HMDB0000162;PW_C000106;MJDBOTE0000527","HMDB0030091","HMDB0251973","HMDB0001406;PW_C001086","HMDB0029841","HMDB0011731","HMDB0000630;MJDBOTE0000458","HMDB0001988","HMDB0012141;LMFA01050453","HMDB0011622","HMDB0031437","HMDB0029433","HMDB0000089;HMDB0248553;PW_C000061;MJDBOTE0000789","HMDB0031842;HMDB0003464;MJDBOTE0001114","HMDB0060374","HMDB0001545;PW_C001188","HMDB0260564","HMDB0301918","HMDB0006061","HMDB0005199;HMDB0042012","HMDB0000300;PW_C000204;MJDBOTE0000838","HMDB0033566","HMDB0011161","HMDB0253028","HMDB0000050;PW_C000034;HMDB0247583;MJDBOTE0000767","HMDB0031181","HMDB0253757","HMDB0246853","HMDB0029388","HMDB0029157","HMDB0029010","HMDB0013238;LMFA07070068","HMDB0031327","HMDB0059622;MJDBOTE0001043","HMDB0062180","HMDB0028912","HMDB0030326","HMDB0033855","HMDB0060683;PW_C040565","HMDB0015407","HMDB0006766","HMDB0242690","HMDB0242536;LMFA01060203;LMSP01080020","HMDB0245567;HMDB0001509","HMDB0246440","HMDB0034244","HMDB0000259;PW_C000178;MJDBSJD0000073","HMDB0254039;HMDB0028933","HMDB0301803","HMDB0302835;HMDB0303167;HMDB0000235;PW_C000158;MJDBOTE0000825","HMDB0014634;MJDBOTE0000907","HMDB0036313","HMDB0035833","HMDB0000954;MJDBOTE0000325","HMDB0033463","HMDB0032238","HMDB0015052;HMDB0254689","HMDB0002059;HMDB0304547","HMDB0030211","HMDB0256292","HMDB0032662;LMFA01050436","HMDB0034188","HMDB0005175;PW_C002411","HMDB0031876","HMDB0032538","HMDB0252419","HMDB0257146","HMDB0015536","HMDB0041140","HMDB0247158","HMDB0032616;HMDB0034069;MJDBOTE0001099","HMDB0253432","HMDB0038847","HMDB0062222;LMFA03070025;HMDB0012611","HMDB0013070","HMDB0004610;LMSP01030001","HMDB0040906","HMDB0013286","HMDB0033701","HMDB0006764;PW_C002914;HMDB0006762","HMDB0246264","HMDB0253066","HMDB0033451","HMDB0059747","HMDB0031760","HMDB0258417","HMDB0303027;LMST02030164","HMDB0029131","HMDB0000374;PW_C000273;LMST02030161;MJDBOTE0000846","HMDB0302428","HMDB0032055","HMDB0037562","HMDB0255464","HMDB0011136;PW_C006775","HMDB0304294","HMDB0029683;LMPK15040002","HMDB0060389;PW_C040532","HMDB0253608","HMDB0116387;PW_C063625","HMDB0056292","HMDB0251769","HMDB0004080;LMFA08040056;LMFA08040001","HMDB0029686","HMDB0252349","HMDB0252073","HMDB0029920","HMDB0029638","HMDB0248559","HMDB0041512","HMDB0000560;LMFA01030257","HMDB0013815","HMDB0032625","HMDB0256988","HMDB0244374","HMDB0251337","HMDB0303335","HMDB0257483;LMFA01030267","HMDB0251115","HMDB0011653;LMST02030183","HMDB0245964","HMDB0010386","HMDB0028791","HMDB0015073","HMDB0251271","HMDB0302241","HMDB0242438","HMDB0000949;HMDB0000951;HMDB0242411","HMDB0034652","HMDB0031195","HMDB0015359","HMDB0246265","HMDB0011627","HMDB0001496","HMDB0036651;HMDB0253726","HMDB0060442","HMDB0250782;PW_C000136;HMDB0000210;MJDBOTE0000845","HMDB0005796","HMDB0258787","HMDB0242064","HMDB0299289","HMDB0033345","HMDB0039531;MJDBOTE0001752","HMDB0040276","HMDB0034578","HMDB0252101","HMDB0304217","HMDB0255543","HMDB0240687","HMDB0258984","HMDB0012150","HMDB0029472","HMDB0030406","HMDB0041922;MJDBOTE0001255","HMDB0004437","HMDB0029598","HMDB0258506","HMDB0013674","HMDB0247837;HMDB0011537","HMDB0037012","HMDB0245269;HMDB0004362;LMFA06000051","HMDB0037071","HMDB0000216;PW_C000142;MJDBOTE0001316","HMDB0252105;HMDB0015333","HMDB0253994","HMDB0041618","HMDB0000472;PW_C000358","HMDB0031565","HMDB0003634","HMDB0249444","HMDB0252966;LMPR0103410007","HMDB0035267","HMDB0030273","HMDB0257364;LMST01080038","HMDB0031059;HMDB0029683;LMPK15040002","HMDB0031336","HMDB0255888","HMDB0259744","HMDB0258910","HMDB0031728","HMDB0255105;HMDB0031314","HMDB0030325","HMDB0011505","HMDB0250647","HMDB0011507","HMDB0251574","HMDB0040615","HMDB0040668","HMDB0033629","HMDB0007852","HMDB0257238","HMDB0012204;MJDBZSJ0000114","HMDB0244272","HMDB0039212","HMDB0257169","HMDB0001565","HMDB0242040","HMDB0248633","HMDB0249627","HMDB0247607;LMFA08010004;HMDB0002117","HMDB0011473","HMDB0013034","HMDB0010387","HMDB0012215;MJDBZSJ0000131","HMDB0028850","HMDB0246483","HMDB0302615","HMDB0250266;LMST01130032","HMDB0250583;LMST01010116","HMDB0241808","HMDB0034107","HMDB0059810","HMDB0000944;LMFA01010022;HMDB0304269","HMDB0249513","HMDB0257360","HMDB0035722","HMDB0302963;HMDB0304091","HMDB0010715","HMDB0241296","HMDB0251559","HMDB0248988","HMDB0029126","HMDB0303012","HMDB0032477","HMDB0041082","HMDB0013625","HMDB0304235","HMDB0006048;LMST02020017","HMDB0010382","HMDB0246183","HMDB0014531","HMDB0040940","HMDB0251628","HMDB0035699","HMDB0252090;HMDB0014961","HMDB0242145;HMDB0062549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