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Ze Universityhttps://www.ebi.ac.uk/ena/browser/view/PRJNA751413human vaginal metagenomeThe vaginal microbiome is an ecosystem that involves complex interactions. Currently, our knowledge about the role of the vaginal microbiome in health and disease relies mainly on differential microbial abundance, and little is known about the role of microbial interactions in the context of human disease. Herein, we constructed and compared microbial co-abundance networks using 87 subjects from Taiwan. We identified 1,449 significantly different species co-abundances from totally 8,778 co-abundances, with 814 and 851 species co-abundances from HPV infected patients and healthy individuals, respectively. In particular, 105 species co-abundances showed HPV-specific results and 72 showed non-HPV specific. In addition, 13 KEGG functional pathways were significantly enriched in HPV infected patients, and four KEGG pathways in healthy individuals. This study has identified a number of key species and pathways in HPV infected patients and provides evidence that dysbiosis of the vaginal microbial ecosystem can not only be assessed by the altered abundance level but can also be seen at the level of microbial interaction, at least in terms of co-abundances, which expands our current knowledge regarding microbial dysbiosis in diseases.ENAHPV., Human papillomavirus, human papillomavirus HPV, Patient, Human Papilloma Virus, Clients, Clientsurface wipe, absorbant pad, swab, specimen sponge, sampling sponge, sample pad., polysponge0.00.00.00.00.0falseVaginal swab samplesVaginal microbial co-abundance networks show specificity in patients infected with human papillomavirus2022-05-122022-01-22PRJNA7514131632839