{"database":"Pride","file_versions":[{"headers":{"Content-Type":["application/json"]},"body":{"files":{"Raw":["ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A266MA2-SpectraFile.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A264MA2-SpectraFile.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A239MA2-40-54898.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A226MA2-40-44283.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A156MA2-40-32919.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A265MA2-SpectraFile.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A199MA2-40-40670.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A184MA2-40-37967.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A174MA2-40-36063.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A193MA2-40-38202.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A262MA2-40-63966.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A236MA2-40-52088.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A160MA2-40-33514.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A157MA2-40-32920.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A228MA2-40-47220.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A184MA2-SpectraFile.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A185MA2-SpectraFile.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A249MA2-40-57095.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A123MA2-40-11577.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A140MA2-40-30000.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A237MA2-SpectraFile_090517144348.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A149MA2-40-30760.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A281MA2-40-72019.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A142MA2-40-30674.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A252MA2-40-58485.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A165MA7-40-34059.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A237MA2-40-52900.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A232MA2-40-49445.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A124MA2-40-11578.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A238MA2-40-54894.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A192MA2-40-38200.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A145MA2-40-30753.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A245MA2-40-57087.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A263MA2-40-67551.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A175MA2-40-36064.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A200MA2-40-40671.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A153MA2-40-32149.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A263MA2-SpectraFile.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A284MA2-40-73174.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A159MA2-40-33513.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A261MA2-40-63965.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A272MA2-40-69208.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A154MA2-40-32150.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A173MA2-40-36062.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A82MA2-40-6467.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A296MA2-40-75576.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A259MA2-40-63963.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A255MA2-40-58488.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A248MA2-40-57093.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A177MA2-40-36068.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A150MA2-40-31560.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A155MA2-40-32918.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A147MA2-40-30755.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A141MA2-40-30001.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A136MA2-40-29998.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A242MA2-40-57081.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A121MA2-40-10900.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A230MA2-40-49441.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A235MA2-40-52086.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A122MA2-40-11576.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A197MA2-40-40665.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A229MA2-40-47866.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A256MA2-40-63961.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A163MA2-40-33855.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A267MA2-40-69149.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A250MA2-40-57705.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A231MA2-40-49443.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A257MA2-40-63962.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A271MA2-40-69209.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A264MA2-40-67552.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A165MA2-40-34009.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A169MA2-40-35101.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A138MA2-40-29999.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A183MA2-SpectraFile.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A291MA2-40-73683.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A246MA2-40-57089.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A260MA2-40-63964.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A146MA2-40-30754.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A198MA2-40-40669.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A170MA2-40-35125.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A151MA2-40-31561.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A172MA2-40-36061.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A148MA2-40-30756.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A67MA2-40-4447.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A277MA2-40-72003.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A152MA2-40-32148.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A247MA2-40-57091.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A254MA2-40-58487.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A72MA2-40-6220.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A225MA2-SpectraFile.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A176MA2-40-36067.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A268MA2-40-69150.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A233MA2-40-52082.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A278MA2-40-72011.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A265MA2-40-67553.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A164MA2-40-34008.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A201MA2-40-39211.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A251MA2-40-57707.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A266MA2-40-67554.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A226MA2-SpectraFile.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A167MA2-40-34369.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A243MA2-40-57083.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A282MA2-40-72021.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A196MA2-40-38532.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A240MA2-40-54902.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A283MA2-40-72516.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A185MA2-40-37968.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A86MA2-40-6670.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A276MA2-40-70540.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A292MA2-40-73681.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A225MA2-40-44282.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A279MA2-40-72014.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A183MA2-40-37966.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A275MA2-40-70538.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A273MA2-40-73691.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A274MA2-40-73689.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A191MA2-40-38218.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A253MA2-40-58486.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A166MA2-40-34368.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A237MA10-40-54116.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A234MA2-40-52084.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A280MA2-40-72017.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A241MA2-40-54956.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A143MA2-40-30704.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A144MA2-40-30752.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A244MA2-40-57085.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A227MA2-40-47216.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A295MA2-40-75574.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A125MA2-40-11579.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A70MA2-40-4918.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A161MA2-40-33515.RAW","ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/SPR302A289MA2-40-73173.RAW"],"Xls":["ftp://ftp.pride.ebi.ac.uk/pride/data/archive/2016/12/PXD002995/MSQuant.xls"]},"type":"primary"},"statusCode":"OK","statusCodeValue":200}],"scores":{"citationCount":0,"reanalysisCount":0,"viewCount":305,"searchCount":0},"additional":{"labhead_mail":["foster@chibi.ubc.ca"],"submitter":["Leonard Foster"],"technology_type":["Affinity purification coupled with mass spectrometry proteomics","Mass Spectrometry"],"software":["Not available"],"submitter_keywords":["Pathogenesis","Virulence","Bacteria"],"full_dataset_link":["https://www.ebi.ac.uk/pride/archive/projects/PXD002995"],"sample_protocol":["Please see the details for PXD002933. THese samples were processed in the same way"],"repository":["Pride"],"quantification_method":[""],"modification":[""],"data_protocol":["Please see the details for PXD002933. THese samples were processed in the same way"],"omics_type":["Proteomics"],"labhead":["Leonard Foster"],"instrument_platform":[""],"labhead_affiliation":["University of British Columbia"],"submission_type":["PARTIAL"],"species":["Homo Sapiens (human)","Escherichia Coli"],"submitter_mail":["foster@chibi.ubc.ca"],"publication":["27018634 Law RJ, Law HT, Scurll JM, Scholz R, Santos AS, Shames SR, Deng W, Croxen MA, Li Y, de Hoog CL, van der Heijden J, Foster LJ, Guttman JA, Finlay BB. Quantitative Mass Spectrometry Identifies Novel Host Binding Partners for Pathogenic Escherichia coli Type III Secretion System Effectors. J Proteome Res. 2016 May 6;15(5):1613-22 10.1021/acs.jproteome.6b00074"],"curator_keywords":["Biological"],"submitter_affiliation":["University of British Columbia"],"submitter_country":["Canada"],"pubmed_abstract":["Enteropathogenic and enterohemorrhagic Escherichia coli cause enteric diseases resulting in significant morbidity and mortality worldwide. These pathogens remain extracellular and translocate a set of type III secreted effector proteins into host cells to promote bacterial virulence. Effectors manipulate host cell pathways to facilitate infection by interacting with a variety of host targets, yet the binding partners and mechanism of action of many effectors remain elusive. We performed a mass spectrometry screen to identify host targets for a library of effectors. We found five known effector targets and discovered four novel interactions. Interestingly, we identified multiple effectors that interacted with the microtubule associated protein, ensconsin. Using co-immunoprecipitations, we confirmed that NleB1 and EspL interacted with ensconsin in a region that corresponded to its microtubule binding domain. Ensconsin is an essential cofactor of kinesin-1 that is required for intracellular trafficking, and we demonstrated that intracellular trafficking was severely disrupted during wild type EPEC infections but not during infections with ΔnleB1 or ΔespL mutants. Our findings demonstrate the efficacy of quantitative proteomics for identifying effector-host protein interactions and suggest that vesicular trafficking is a crucial cellular process that may be targeted by NleB1 and EspL through their interaction with ensconsin."],"pubmed_title":["Quantitative Mass Spectrometry Identifies Novel Host Binding Partners for Pathogenic Escherichia coli Type III Secretion System Effectors."],"pubmed_authors":["Law Robyn J RJ, Law Hong T HT, Scurll Joshua M JM, Scholz Roland R, Santos Andrew S AS, Shames Stephanie R SR, Deng Wanyin W, Croxen Matthew A MA, Li Yuling Y, de Hoog Carmen L CL, van der Heijden Joris J, Foster Leonard J LJ, Guttman Julian A JA, Finlay B Brett BB"],"name_synonyms":["MGC130048, gamma sarcoglycan, vesicular transport., nonselective vesicle transport, SGCG_HUMAN, DMDA1, 35 kDa dystrophin-associated glycoprotein, protein complex, protein sorting along secretory pathway, Proteins, SG-gamma, A4, Gene, protein, neurotubule, gamma (35kDa dystrophin-associated glycoprotein), protein-containing complex, TYPE, SGCG, LGMD2C, Protein Gene Products, DAGA4, Gene Proteins, DMDA, native protein, vesicle transport, 35kD dystrophin-associated glycoprotein, SCARMD2, Protein, 35DAG, Gene Products, gamma-sarcoglycan, sarcoglycan, microtubuli, associated, MAM, gamma-SG, protein aggregate, SCG3, Microtubule, microtubulus, vesicle trafficking"],"description_synonyms":["Raw., Svc, Bru, Del(8)44H, Col4a-1, Data Set"],"pubmed_abstract_synonyms":["MGC130048, Co-Immunoprecipitations, host organism, IPP2A2, mode of action, pharmacodynamics, nucleocytoplasm, Enterohemorrhagic E coli, A4, Infestations and Infections, l(3)96Fd, MAP1 Microtubule-Associated Protein, Microtubule Associated, protein, infectivity, Co Immunoprecipitation, Case Fatality Rates, 5730420M11Rik, Death Rates, diseases, symptoms, diseases and disorders, 3, HLHm7, Excess Mortalities, HLHm8, Analysis, 7, Microtubule Associated Protein 4, protein aggregate, Microtubule Associated Protein 7, Microtubule Associated Protein 1, Microtubule Associated Protein 2, Microtubule Associated Protein 3, Mass Spectrum Analysis, gamma sarcoglycan, SET, viral infection, Enteropathogenic, human disease, Analyses, Crude Mortality Rates, TAF-I, Co-Immunoprecipitation, Precipitation, E coli, Microtubule Associated Proteins, MAP3, CG7765, MAP2, Epithelial MAP, MAP1, MAP4, Enterohemorrhagic E. coli, DmelCG4299, IGAAD, set, Microtubule Associated Protein, Immune, DmelCG10574, l(2R)W12, CFR Case Fatality Rate, E(SPL)m7, gamma-sarcoglycan, Homo sapiens disease, CG7776, Infections and Infestations, Dmkin, Age-Specific Death Rate, Precipitations, phapii, screening, Escherichia coli, kinesin, KHC, DK, frequency, SG-gamma, e(Pc), Crude Death, StF-IT-1, L[[3]]CP3, Spectrum Analysis, Crude Mortality, DKH, EHEC, Spectroscopy, Mortality, khc, EPEC, Su(H)[[m8]], Diseases, cellular projection, Pathogenicity, KIN, Kin, sarcoglycan, Epithelial Microtubule-Associate Protein, internal to cell, Microtubule, region, Microtubule-Associated, Ensconsin, DmK, DmelCG7776, HLA-DR-associated protein II, l(2)k13219, death rate, DI-2, cell process, DmKHC, I-2Dm, kin, Spectrometry, Kinesin-1, signs, Mortalities, Infection and Infestation, CG4299, gamma (35kDa dystrophin-associated glycoprotein), surveillance, morbidity, Ensconsin., I-2PP1, disease, Mortality Rate, Crude Death Rate, DMDA, TAF-IBETA, E(spl)bHLH, DmelCG7765, anon-EST:Liang-1.71, microtubule severing activity, 35kD dystrophin-associated glycoprotein, DmelLcp3, E(PC), BG:DS02740.11, anon-48Ac, TAF-Ibeta, Mortality Determinant, Hes, cellular physiological process, i2pp2a, Microtubule-Associated Protein, other disease, GH05739, SGCG_HUMAN, CG8365, ESPL, En(spl)-C, Peptidomics, Mortality Declines, CG8361, Excess, Gene, 115 kDa, KIF5A, Crude Mortality Rate, Spectrum Analyses, protein-containing complex, mortality measurement, cofactors, TYPE, PHAPII, Age-Specific Death, Mortality Determinants, DAGA4, Crude, MAP1 Microtubule Associated Protein, Rate, Determinant, III, GH14582, 35DAG, Gene Products, Mass, Immune Precipitations, disease or disorder, Case Fatality, l(2)k13314, Enteropathogenic E. coli, MAM, gamma-SG, SCG3, Immune Precipitation, E(spl) m7, Mass Spectroscopy, HLH-m7, E(spl) m8, DmelCG2043, protoplasm, Differential Mortality, Excess Mortality, En(spl)m7, lcp3, protoplast, occurrence, ligand, ipp2a2, prevalence, LCP-3, l(2)W12, 2pp2a, Age-Specific, clinical infection, CG10574, pgs, non-neoplastic, Infestation and Infection, E(Spl), microtubule/chromatin interaction, cell growth and/or maintenance, 2PP2A, CP3, mechanism of action, taf-ibeta, m7, Espl, m8, Mortality Rates, E MAP 115, mortality rate, Crude Death Rates, dSET, dSet, disorder, site, En(spl), E(spl), Associated Protein, Age Specific Death Rate, incidence, Morbidities, cell physiology, LcpIII, findings, Mortality Decline, 35 kDa dystrophin-associated glycoprotein, M7, M8, protein complex, Proteins, E(spl)-C, disorders, igaad, clone 1.71, Protein 7, medical condition, single-organism cellular process, DmelCG8365, Cell, SGCG, DmelCG8361, group, LGMD2C, Case Fatality Rate, MS, MAP3 Microtubule-Associated Protein, Epithelial Microtubule Associate Protein, survival, native protein, I-2PP2A, Dm I-2, Protein, I2PP2A, Infection, sequence, condition, bHLHb35, MAP2 Microtubule Associated Protein, bHLHb36, Determinants, Death, LCP3, outbreaks, Library, Mass Spectrum Analyses, MAP3 Microtubule Associated Protein, Rates, Mass Spectrum, Death Rate, E(spl)m7, cellular process, kinesin-1, cofactor, DMDA1, DMLCP3, ensemble, E(spl)-M7, E(spl)m8, l(2)28-28-12, E-MAP-115, anon-35Fa, MAP2 Microtubule-Associated Protein, Age-Specific Death Rates, endemics, primary structure of sequence macromolecule, Protein Gene Products, Microtubule-Associated Protein 3, DmelCG5861, extracellular, Gene Proteins, dSET/TAF-Ibeta, Differential, Microtubule-Associated Protein 7, E(spl)M7, 2610030F17Rik, pharmacologic action, anon-35Fc, E(spl)-m8, E(spl)-m7, E(spl)M8, SCARMD2, Microtubule-Associated Protein 1, Microtubule-Associated Protein 2, Decline, Enterohemorrhagic, epidemics, virulence, CG2043, AA407739, Differential Mortalities, e(spl)"],"pubmed_title_synonyms":["Mass Spectrum Analysis, Alkalescens-Dispar Group, Mass Spectrum, T3SS Secretion System, host organism, Diffusely Adherent Escherichia coli, Bacterium coli, Bacterial Secretion System, Escherichia/Shigella coli, Enteroinvasive E. coli, Analyses, ligand, System, Spectrometry, bacterium E3, E coli, Type 3 Secretion System, Type III Secretion System, Spectrum Analyses, EAggEC, T3SS, Enteroaggregative E. coli, Spectrum Analysis, E. coli, Spectroscopy, Eschericia coli, Enteroaggregative Escherichia coli, MS, Bacterium coli commune, Diffusely Adherent E. coli, Bacillus coli, Type 3 Secretion Systems, Escherchia coli, Mass, Type III., Secretion System, Enteroinvasive Escherichia coli, Analysis, Enterococcus coli, Mass Spectrum Analyses, Mass Spectroscopy, T3SS Secretion"],"view_count":["305"],"additional_accession":[]},"is_claimable":false,"name":"The E. coli type III secreted effectors NleB and EspL interact with the microtubule associated protein ensconsin to disrupt vesicle trafficking, part 2","description":"This is the companion dataset to PXD002933. This contains additional RAW files","dates":{"publication":"2016-12-22","submission":"2015-10-01"},"accession":"PXD002995","cross_references":{"TAXONOMY":["NEWT:3555","NEWT:71647","NEWT:35554","NEWT:32046","NEWT:544496","NEWT:2042546","NEWT:259447","NEWT:45351","NEWT:445974","NEWT:43179","NEWT:180454","NEWT:5722","NEWT:1129","NEWT:55153","NEWT:309800","NEWT:281395","NEWT:1211601","NEWT:876138","NEWT:10036","NEWT:498019","NEWT:1351","NEWT:1438992","NEWT:1352","NEWT:2649997","NEWT:1147161","NEWT:224326","NEWT:1333499","NCBITaxon:79857","NEWT:1096976","NEWT:95648","NEWT:1589","NEWT:135622","NEWT:383379","NEWT:10029","NEWT:913645","NEWT:317447","NEWT:4688","NEWT:7955","NEWT:7959","NEWT:2261","NEWT:31156","NEWT:4442","NEWT:192875","NEWT:59729","NEWT:2164133","NEWT:1316931","NEWT:224308","NEWT:3347","NEWT:511145","NEWT:931281","NEWT:77133","NEWT:145481","NCBITaxon:79824","NCBITaxon:4563","NEWT:5755","NEWT:44689","NEWT:5759","NEWT:1736231","NEWT:1392","NEWT:498217","NEWT:2242","NEWT:11320","NEWT:286","NEWT:391619","NEWT:246196","NEWT:287","NEWT:246197","NEWT:10239","NEWT:44685","NEWT:161934","NEWT:1148","NEWT:5508","NEWT:5507","NEWT:55571","NEWT:35500","NEWT:1140","NEWT:1143","NEWT:4896","NEWT:1390","NEWT:11557","NEWT:1094343","NEWT:1336795","NEWT:644042","NEWT:1773","NEWT:1182590","NEWT:3712","NEWT:82380","NEWT:935293","NEWT:375146","NEWT:263","NEWT:52283","NEWT:284812","NEWT:8175","NEWT:43330","NEWT:1603293","NEWT:408169","NEWT:47946","NEWT:3702","NEWT:243277","NEWT:7067","NEWT:2850","NEWT:408172","NEWT:408170","NEWT:3708","NEWT:332648","NEWT:536231","NEWT:1436733","NEWT:460519","NEWT:572307","NEWT:1432138","NEWT:1424507","NEWT:1194599","NEWT:272844","NEWT:9483","NEWT:1513458","NCBITaxon:40559","NEWT:84588","NEWT:480","NEWT:67767","NEWT:46835","NEWT:109757","NEWT:300852","NEWT:1502","NEWT:376686","NEWT:95486","NEWT:508771","NEWT:1883446","NEWT:253","NCBITaxon:2759","NEWT:1233435","NEWT:93061","NEWT:93062","NCBITaxon:4932","NEWT:644223","NEWT:235443","NEWT:108458","NEWT:272623","NEWT:272624","NEWT:983964","NEWT:118499","NEWT:32644","NEWT:527796","NEWT:499175","NEWT:109779","NEWT:3745","NEWT:1715989","NCBITaxon:4751","NEWT:476272","NEWT:3747","NEWT:195051","NEWT:3988","NEWT:1255228","NEWT:649908","NEWT:410289","NEWT:373153","NEWT:352472","NEWT:1071661","NEWT:360094","NEWT:470","NEWT:41364","NEWT:1313","NEWT:39491","NCBITaxon:5811","NEWT:29491","NEWT:2014887","NEWT:33952","NEWT:571256","NEWT:40483","NEWT:9031","NEWT:1872122","NEWT:7091","NEWT:108931","NEWT:1055524","NEWT:9778","NEWT:150475","NEWT:303","NEWT:7111","NEWT:347515","NEWT:9534","NEWT:5180","NEWT:256737","NEWT:9541","NEWT:185579","NEWT:941442","NEWT:13076","NEWT:7108","NEWT:40479","NEWT:317","NEWT:1006581","NEWT:885318","NEWT:39488","NEWT:550","NEWT:4081","NEWT:273068","NEWT:554","NEWT:98334","NEWT:451516","NEWT:36185","NEWT:1225786","NEWT:7574","NEWT:1715256","NEWT:575412","NEWT:929793","NEWT:29204","NEWT:28112","NEWT:6494","NEWT:6491","NEWT:507601","NEWT:643680","NCBITaxon:6157","NEWT:6239","NEWT:162425","NEWT:216257","NEWT:102169","NEWT:9986","NEWT:4054","NEWT:1268063","NEWT:1263854","NEWT:118503","NEWT:2059687","NEWT:160488","NEWT:28104","NEWT:407821","NCBITaxon:2","NEWT:985076","NEWT:1215323","NEWT:986","NEWT:52641","NEWT:7159","NEWT:28532","NEWT:353152","NEWT:27448","NEWT:1194669","NEWT:51329","NEWT:243230","NEWT:1080772","NEWT:8479","NEWT:6063","NEWT:49240","NEWT:104395","NEWT:6289","NEWT:6287","NEWT:300641","NEWT:727","NEWT:9796","NEWT:725","NEWT:469008","NEWT:256318","NEWT:206411","NCBITaxon:6191","NEWT:596153","NEWT:1836","NEWT:80863","NEWT:105231","NEWT:52638","NEWT:4097","NEWT:884204","NEWT:9785","NEWT:6279","NEWT:1123869","NEWT:9544","NEWT:7370","NEWT:83906","NCBITaxon:780","NCBITaxon:1502","NEWT:6282","NEWT:1134506","NEWT:38783","NEWT:4006","NEWT:6426","NCBITaxon:5476","NEWT:6669","NEWT:9935","NEWT:89453","NEWT:51515","NEWT:51511","NEWT:8845","NEWT:92867","NEWT:92866","NEWT:5334","NEWT:51750","NEWT:202950","NEWT:382352","NEWT:413071","NEWT:632957","NEWT:9925","NEWT:89462","NEWT:8839","NEWT:4232","NEWT:2758385","NEWT:11298","NEWT:171101","NEWT:714","NEWT:421932","NEWT:312017","NEWT:196627","NEWT:870435","NEWT:5315","NEWT:9913","NEWT:105841","NEWT:337330","NEWT:2666255","NEWT:2285","NEWT:1392998","NEWT:380394","NEWT:981087","NEWT:180066","NEWT:226900","NEWT:563041","NEWT:326423","NEWT:452467","NEWT:36111","NEWT:326424","NEWT:1416333","NEWT:1678078","NEWT:749906","NEWT:418985","NEWT:749907","NEWT:145263","NEWT:694569","NEWT:27606","NEWT:9739","NEWT:59202","NEWT:9975","NEWT:51953","NEWT:3197","NEWT:860688","NEWT:13443","NEWT:36329","NEWT:62615","NCBITaxon:3044782","NEWT:72407","NEWT:349741","NEWT:157295","NEWT:2096","NEWT:9721","NEWT:137221","NEWT:9963","NEWT:1617910","NEWT:565050","NEWT:2785785","NEWT:411901","NEWT:105884","NCBITaxon:9615","NEWT:58334","NEWT:1193501","NEWT:58331","NEWT:6689","NEWT:70448","NEWT:698936","NEWT:9940","NEWT:521001","NEWT:192011","NEWT:1813887","NEWT:224911","NCBITaxon:11552","NEWT:6945","NEWT:184922","NEWT:6703","NEWT:2104","NEWT:2","NEWT:157546","NEWT:474186","NEWT:38942","NEWT:307972","NEWT:1496","NEWT:2102","NEWT:4513","NEWT:1247","NEWT:6938","NEWT:376741","NCBITaxon:10407","NEWT:1736309","NEWT:10360","NEWT:47664","NEWT:317548","NEWT:3654","NEWT:237561","NEWT:5833","NEWT:6928","NEWT:36745","NEWT:272563","NEWT:82688","NEWT:3885","NEWT:3888","NEWT:5821","NEWT:44139","NCBITaxon:4896","NEWT:6915","NEWT:3649","NEWT:101510","NEWT:28903","NEWT:3880","NEWT:272559","NEWT:28909","NEWT:515849","NEWT:3641","NEWT:466585","NEWT:1000589","NEWT:85963","NEWT:85962","NEWT:143361","NEWT:398580","NEWT:4565","NEWT:1264690","NEWT:515619","NEWT:34305","NCBITaxon:183674","NEWT:167387","NEWT:84645","NEWT:44586","NEWT:626528","NEWT:139927","NEWT:4558","NEWT:209285","NEWT:5888","NEWT:211586","NEWT:747078","NEWT:1282","NEWT:1283","NEWT:431241","NEWT:4550","NEWT:1000561","NEWT:2133","NEWT:294381","NEWT:197","NEWT:1390363","NEWT:288705","NEWT:29176","NEWT:4787","NEWT:3218","NEWT:556182","NEWT:1270","NEWT:374990","NEWT:1432059","NEWT:156471","NEWT:4784","NEWT:360106","NEWT:156476","NEWT:360104","NEWT:10117","NEWT:10116","NEWT:1280","NEWT:10358","NEWT:1735272","NEWT:83334","NEWT:83332","NEWT:317513","NEWT:580240","NEWT:294128","NEWT:11676","NEWT:100226","NEWT:4530","NEWT:75058","NEWT:13616","NEWT:172","NEWT:296543","NEWT:173","NEWT:316435","NEWT:42157","NEWT:1895","NEWT:1034304","NEWT:105023","NEWT:866628","NEWT:215358","NEWT:64152","NEWT:4924","NEWT:749200","NEWT:9378","NEWT:990346","NEWT:145953","NEWT:257309","NEWT:100816","NEWT:230741","NCBITaxon:1313","NEWT:44544","NEWT:4911","NEWT:645463","NEWT:129249","NEWT:1077286","NEWT:943129","NEWT:990119","NEWT:1111708","NEWT:227321","NEWT:493760","NEWT:106590","NEWT:260710","NEWT:257313","NEWT:3827","NEWT:400772","NEWT:128161","NEWT:930945","NEWT:106592","NEWT:46704","NEWT:1187947","NEWT:269796","NEWT:10312","NCBITaxon:1773","NEWT:54571","NEWT:9598","NEWT:8030","NEWT:1639","NEWT:188229","NEWT:3818","NEWT:4909","NEWT:759272","NEWT:432359","NEWT:1182263","NEWT:943146","NEWT:2711","NEWT:537457","NEWT:9103","NEWT:29159","NEWT:10306","NEWT:8022","NEWT:145943","NEWT:595536","NEWT:240906","NEWT:593117","NEWT:89920","NEWT:29158","NEWT:3635","NEWT:5811","NEWT:180923","NEWT:411483","NEWT:884019","NEWT:198215","NEWT:411490","NEWT:169963","NEWT:225117","NEWT:746128","NEWT:43665","NEWT:1266464","NEWT:367830","NEWT:178616","NEWT:375451","NEWT:357","NEWT:411469","NEWT:84023","NEWT:1679","NEWT:559292","NEWT:411464","NEWT:411460","NEWT:2762","NEWT:1174673","NEWT:1328426","NEWT:562","NEWT:411470","NEWT:2094720","NCBITaxon:2697049","NCBITaxon:138","NEWT:28038","NEWT:1663","NEWT:1423","NEWT:4932","NEWT:3603","NEWT:2759","NEWT:3847","NEWT:38293","NEWT:1428","NEWT:327159","NEWT:178876","NEWT:1660","NEWT:327160","NEWT:573","NEWT:571","NEWT:241368","NEWT:42528","NEWT:2664373","NEWT:190802","NEWT:9417","NEWT:1216979","NEWT:7237","NEWT:115104","NEWT:1121114","NEWT:663","NEWT:1081927","NEWT:1238993","NEWT:67825","NEWT:187878","NEWT:220668","NEWT:1821314","NEWT:1249668","NEWT:9646","NEWT:5286","NEWT:7227","NEWT:7469","NEWT:9402","NEWT:9644","NEWT:415540","NEWT:675060","NEWT:334542","NEWT:313625","NEWT:27592","NEWT:426428","NEWT:63459","NEWT:1276815","NEWT:588858","NEWT:9639","NCBITaxon:11071","NEWT:242231","NEWT:197221","NEWT:7215","NEWT:2172103","NEWT:7460","NEWT:434271","NEWT:747679","NEWT:42752","NEWT:746360","NEWT:89764","NEWT:470150","NEWT:543734","NEWT:73239","NEWT:38018","NEWT:226186","NEWT:8782","NEWT:115357","NEWT:435590","NEWT:1902","NEWT:1908","NEWT:13164","NEWT:216129","NEWT:2664179","NEWT:623","NEWT:7038","NEWT:6192","NCBITaxon:38727","NEWT:2829","NEWT:366581","NEWT:216599","NEWT:216595","NEWT:40559","NEWT:8355","NEWT:633","NEWT:9685","NEWT:7029","NEWT:1283300","NEWT:186990","NEWT:632","NEWT:6183","NEWT:630","NEWT:334747","NEWT:61235","NEWT:343691","NEWT:15368","NEWT:1491466","NEWT:436486","NEWT:51655","NEWT:170187","NEWT:260707","NEWT:185431","NEWT:29760","NEWT:260704","NEWT:1719","NEWT:703612","NEWT:260705","NEWT:692672","NEWT:2697049","NEWT:1216981","NEWT:7004","NCBITaxon:6073","NEWT:1089448","NEWT:1329349","NEWT:607699","NEWT:208963","NEWT:208964","NEWT:27337","NEWT:575584","NEWT:8727","NEWT:8726","NEWT:10090","NEWT:4120","NEWT:5693","NEWT:2186","NEWT:8724","NEWT:8723","NEWT:37334","NCBITaxon:10359","NEWT:1203258","NEWT:242619","NEWT:49317","NEWT:160791","NEWT:34073","NEWT:373995","NEWT:5689","NEWT:544404","NEWT:37349","NEWT:4113","NEWT:837","NEWT:36015","NEWT:5691","NEWT:48479","NEWT:61435","NEWT:627025","NEWT:1097677","NEWT:375939","NEWT:61674","NEWT:1117957","NEWT:6526","NEWT:8709","NEWT:4100","NEWT:1159556","NEWT:5671","NEWT:1076","NEWT:4101","NEWT:6763","NEWT:803","NEWT:29722","NEWT:1692259","NEWT:1486917","NEWT:419947","NEWT:468911","NEWT:817","NEWT:7604","NEWT:818","NEWT:135588","NEWT:1843183","NEWT:5661","NEWT:29719","NEWT:58002","NEWT:6997","NEWT:452589","NEWT:4577","NEWT:5664","NEWT:2157","NEWT:146479","NEWT:1042986","NEWT:1911079","NEWT:69373","NEWT:206189","NEWT:264203","NEWT:1480154","NEWT:1274414","NEWT:9612","NEWT:38626","NEWT:38865","NEWT:3077","NEWT:9615","NEWT:10299","NEWT:112273","NEWT:1147787","NEWT:1440772","NEWT:1355477","NEWT:9605","NEWT:9606","NEWT:90371","NEWT:641501","NEWT:4153","NEWT:7668","NEWT:915099","NEWT:74940","NEWT:13551","NEWT:9600","NEWT:1450511","NEWT:1143193","NEWT:174934","NEWT:2823525","NEWT:9838","NEWT:9839","NEWT:3055","NEWT:4146","NEWT:5478","NEWT:6326","NEWT:5476","NEWT:1450520","NEWT:1042311","NEWT:299767","NEWT:28835","NEWT:1274432","NEWT:2053667","NEWT:1274426","NEWT:9825","NEWT:1274423","NEWT:393765","NEWT:39946","NEWT:9823","NEWT:95602","NEWT:8732","NEWT:314539","NEWT:39947","NEWT:718274","NEWT:1274420","NEWT:578458"],"pubmed":["27018634"]}}