<HashMap><database>ENA</database><file_versions><headers><Content-Type>application/xml</Content-Type></headers><body><files><Fastqsanger.gz>ftp://ftp.sra.ebi.ac.uk/vol1/fastq/DRR146/DRR146877/DRR146877_1.fastq.gz</Fastqsanger.gz><Fastqsanger.gz>ftp://ftp.sra.ebi.ac.uk/vol1/fastq/DRR146/DRR146877/DRR146877_2.fastq.gz</Fastqsanger.gz></files><type>primary</type></body><statusCodeValue>200</statusCodeValue><statusCode>OK</statusCode></file_versions><scores/><additional><omics_type>Genomics</omics_type><strain>Kasalath</strain><center_name>Advanced Genomics Breeding Section, Institute of Crop Science, National Agriculture and Food Research Organization</center_name><full_dataset_link>https://www.ebi.ac.uk/ena/browser/view/PRJDB7228</full_dataset_link><scientific_name>Oryza sativa Indica Group</scientific_name><long_description>The whole genome of an aus-type rice variety Kasalath is resequenced in depth (~40X) by using the NGS technology. Whole genome assembly is performed to generate a pseudomolecule sequence with the high sequence quality and chromosome coverege, which should serve as a secend reference of rice genome for the future analysis of genome-wide diversity within the Asian cultivated rice, particularly in indica rice subpopulation.</long_description><repository>ENA</repository><description_synonyms>red rice, sequence, Oryza sativa, Rice., red rice &lt;Oryza sativa>, rice, Asian cultivated rice, primary structure of sequence macromolecule, Rices</description_synonyms><name_synonyms>strain, Indian rice, Oryza sativa subsp. indica, Oryza sativa (indica group), Sprain, Strain., Oryza sativa (indica cultivar-group), cultivar, Strains, Oryza sativa indica, Sprains, Strains and Sprains, ecotype</name_synonyms></additional><is_claimable>false</is_claimable><name>Oryza sativa Indica Group strain:Kasalath</name><description>Construction of new reference sequence in rice</description><dates><last_updated>2025-09-24</last_updated><first_public>2020-03-24</first_public></dates><accession>PRJDB7228</accession><cross_references><taxon>39946</taxon></cross_references></HashMap>