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yOK200GenomicsTHE ROSLIN INSTITUTEhttps://www.ebi.ac.uk/ena/browser/view/PRJEB39130xref:EuropePMC:PMC7941205xref:EuropePMC:PMC8205168This dataset comprises 48 wild type and 48 CSF1R KO samples from eight rat tissues: 6 brain regions (cerebellum, cortex, hippocampus, hypothalamus, olfactory bulb, striatum), the pituitary gland, and liver.This represents 6 replicates per condition (wild type or KO) per tissue with 3 male and 3 female samples for each condition and tissue.All libraries were 100 base pairs paired-end mRNA-seq, generated by the IMB Sequencing Facility, University of Queensland and sequenced at a depth typically > 10 million reads using an Illumina NovaSeq 6000 sequencing system with NovaSeq S1 flow cell, following the Illumina TruSeq Stranded mRNA (polyA-selected) library preparation protocol.ENAthe brain, hypophysis cerebri, Rat, Fim-2, suprasegmental structures, norvegicus, Laboratory, gland, pituitary body, RNA-seq, Norway Rat, inflammation of pituitary gland, Rattus, hypophysis, CSF-1 receptor, Norway Rats, encephalon, CSF-1R, jecur, pituitary, HDLS, CSFR, rat, Rattus sp. strain Wistar, Mus norvegicus, C-FMS, Rats, Rattus norwegicus, Hp, FIM2, c-fms, Mammals, Laboratory Rats, Whole Transcriptome Shotgun Sequencing, Norway rat, synganglion, Rattus rattiscus, AI323359, brown rat, CSF1R, M-CSFR, Rattus norvegicus, Csfmr., pituitary gland, Encephalon, iecur, proto-oncogene c-Fms, suprasegmental levels of nervous system, rats, CD115, Laboratory Rat, Livers, glandula pituitaria, hypophysitides, pituitary gland inflammation, CSF-1-R, FMS, Fms, mrfms, nervous system, Norway, M-CSF-R, Rattus norvegicus8, Gunn ratsbrown rat, CSF1R, M-CSFR, Rat, Fim-2, Rattus norvegicus, norvegicus, Csfmr., Laboratory, Tissue, Norway Rat, proto-oncogene c-Fms, Rattus, rats, CD115, CSF-1 receptor, Norway Rats, CSF-1R, Laboratory Rat, HDLS, CSFR, rat, Rattus sp. strain Wistar, Mus norvegicus, C-FMS, Rats, Rattus norwegicus, FIM2, c-fms, Mammals, CSF-1-R, Laboratory Rats, FMS, Fms, mrfms, Norway rat, Norway, Rattus rattiscus, AI323359, M-CSF-R, Rattus norvegicus8, Gunn ratsfalse8 rat tissues with CSF1R KORNA-seq of rat brain, liver and pituitary with targeted CSF1R knockout2021-08-302021-08-30PRJEB39130