{"database":"ENA","file_versions":[{"headers":{"Content-Type":["application/json"]},"body":{"files":{"Fastqsanger.gz":["ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR742/009/ERR7422919/ERR7422919_2.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR742/007/ERR7422917/ERR7422917_2.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR742/003/ERR7422913/ERR7422913_1.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR742/008/ERR7422918/ERR7422918_2.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR742/006/ERR7422916/ERR7422916_2.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR742/002/ERR7422912/ERR7422912_1.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR742/009/ERR7422919/ERR7422919_1.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR742/000/ERR7422920/ERR7422920_1.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR742/007/ERR7422917/ERR7422917_1.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR742/003/ERR7422913/ERR7422913_2.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR742/000/ERR7422920/ERR7422920_2.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR742/008/ERR7422918/ERR7422918_1.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR742/006/ERR7422916/ERR7422916_1.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR742/004/ERR7422914/ERR7422914_2.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR742/002/ERR7422912/ERR7422912_2.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR742/005/ERR7422915/ERR7422915_2.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR742/004/ERR7422914/ERR7422914_1.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR742/005/ERR7422915/ERR7422915_1.fastq.gz"]},"type":"primary"},"statusCode":"OK","statusCodeValue":200}],"scores":null,"additional":{"omics_type":["Genomics"],"center_name":["European Bioinformatics Institute","Assistant Professor"],"full_dataset_link":["https://www.ebi.ac.uk/ena/browser/view/PRJEB48960"],"broker_name":["ArrayExpress"],"long_description":["We have performed paired-end RNA-sequencing on budding yeast (BY4741), exposed to 4-nitrocatechol and 3,4-Dihydroxyphenylacetic acid (DOPAC). These two human metabolites were predicted as potential carcinogens using Metabokiller, an artificial intelligence-driven carcinogenicity predictor. The dataset contains 3 biological conditions, i.e. untreated (NC), DOPAC treated (DP), and 4-nitrocatechol treated (4NC). Two rounds of selection procedures have been introduced. The first selection was for canavanine resistance, and the followed selection was for rapid cell division (inferred using growth assay). The experiment was performed in biological triplicates."],"repository":["ENA"],"description_synonyms":["0904/17, Intelligence, Vision Systems, human being, Computer Reasoning, Saccharomyces cerevisiae 'var. diastaticus', clone 2.39, P62, Modern, Brewer's, Computational Intelligence, secondary metabolites, RNA-seq, baker's yeast, Vision System, Knowledge Representation (Computer), sci, Computer, qkr, Computer Vision System, l(3)S090417, Saccharomyces italicus, Saccaromyces cerevisiae, Human, Baker's Yeasts, Sccharomyces cerevisiae, primary metabolites, Homo sapiens, Saccharomyces diastaticus, Representation, SZ1, Knowledge Representations (Computer), KH93F, Acquisition, yeast, Systems, HOW, How, Whole Transcriptome Shotgun Sequencing, metabolites., Machine Intelligence, Man, l(3)j5D5, Computer Vision, lager beer yeast, who, Saccharomyces oviformis, 24B, Artificial, Yeast, l(3)s2612, Man (Taxonomy), AI (Artificial Intelligence), System, Machine, stru, metabolite, Saccharomyes cerevisiae, Baker, Who/How, l(3)S053606, Saccharomyces uvarum var. melibiosus, CG10293, man, human, Computational, S. cerevisiae, Computer Vision Systems, l(3)j5B5, Knowledge (Computer), Saccharomyces cerevisiae (Desm.) Meyen ex E.C. Hansen, S cerevisiae, Candida robusta, Saccharomyces capensis, Modern Man, DmelCG10293, Baker's, qkr[93F], anon-EST:Liang-2.39, Mycoderma cerevisiae, 1883, Reasoning, Baker's Yeast, brewer's yeast, Knowledge Acquisition (Computer), Brewer's Yeast, Baker Yeast"],"name_synonyms":["0904/17, Intelligence, Vision Systems, human being, Computer Reasoning, Saccharomyces cerevisiae 'var. diastaticus', clone 2.39, P62, Modern, Brewer's, Computational Intelligence, secondary metabolites, RNA-seq, baker's yeast, Vision System, Knowledge Representation (Computer), sci, Computer, qkr, Computer Vision System, l(3)S090417, Saccharomyces italicus, Saccaromyces cerevisiae, Human, Baker's Yeasts, Sccharomyces cerevisiae, primary metabolites, Homo sapiens, Saccharomyces diastaticus, Representation, SZ1, Knowledge Representations (Computer), KH93F, Acquisition, yeast, Systems, HOW, How, Whole Transcriptome Shotgun Sequencing, metabolites., Machine Intelligence, Man, l(3)j5D5, Computer Vision, lager beer yeast, who, Saccharomyces oviformis, 24B, Artificial, Yeast, l(3)s2612, Man (Taxonomy), AI (Artificial Intelligence), System, Machine, stru, metabolite, Saccharomyes cerevisiae, Baker, Who/How, l(3)S053606, Saccharomyces uvarum var. melibiosus, CG10293, man, human, Computational, S. cerevisiae, Computer Vision Systems, l(3)j5B5, Knowledge (Computer), Saccharomyces cerevisiae (Desm.) Meyen ex E.C. Hansen, S cerevisiae, Candida robusta, Saccharomyces capensis, Modern Man, DmelCG10293, Baker's, qkr[93F], anon-EST:Liang-2.39, Mycoderma cerevisiae, 1883, Reasoning, Baker's Yeast, brewer's yeast, Knowledge Acquisition (Computer), Brewer's Yeast, Baker Yeast"],"additional_accession":[]},"is_claimable":false,"name":"RNA-seq of S. cerevisiae with DOPAC and 4-nitrocatechol to investigate how Artificial Intelligence uncovers human carcinogenic metabolites","description":"RNA-seq of S. cerevisiae with DOPAC and 4-nitrocatechol to investigate how Artificial Intelligence uncovers human carcinogenic metabolites","dates":{"last_updated":"2022-06-09","first_public":"2022-06-09"},"accession":"PRJEB48960","cross_references":{}}