{"database":"ENA","file_versions":[{"headers":{"Content-Type":["application/json"]},"body":{"files":{"Fastqsanger.gz":["ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR120/059/ERR12081959/ERR12081959_1.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR120/055/ERR12081955/ERR12081955_1.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR120/060/ERR12081960/ERR12081960_2.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR120/058/ERR12081958/ERR12081958_2.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR120/057/ERR12081957/ERR12081957_1.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR120/054/ERR12081954/ERR12081954_2.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR120/057/ERR12081957/ERR12081957_2.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR120/056/ERR12081956/ERR12081956_1.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR120/058/ERR12081958/ERR12081958_1.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR120/061/ERR12081961/ERR12081961_2.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR120/055/ERR12081955/ERR12081955_2.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR120/054/ERR12081954/ERR12081954_1.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR120/060/ERR12081960/ERR12081960_1.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR120/056/ERR12081956/ERR12081956_2.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR120/059/ERR12081959/ERR12081959_2.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR120/061/ERR12081961/ERR12081961_1.fastq.gz"]},"type":"primary"},"statusCode":"OK","statusCodeValue":200}],"scores":null,"additional":{"omics_type":["Genomics"],"center_name":["Ludwig-Maximilians-Universität, Munich Faculty of Biology Anthropology and Human Genomics","European Bioinformatics Institute"],"full_dataset_link":["https://www.ebi.ac.uk/ena/browser/view/PRJEB66457"],"broker_name":["ArrayExpress"],"long_description":["ATAC-seq samples from 2 species and 2 cell types were generated to study cis-regulatory element evolution. Briefly, previously generated urinary stem cell derived iPS-cells (Homo sapiens) of 2 human individuals and fibroblast derived cynomolgus macaque iPSCs (Macaca fascicularis) of 2 individuals (Geuder et al. 2021) were differentiated to neural progenitor cells via dual-SMAD inhibition as three-dimensional aggregation culture (Chambers et al. 2009 Ohnuki et al. 2014). The NPC lines were cultured in NPC proliferation medium and passaged 2 - 4 times until they were dissociated and subjected to ATAC-seq together with the respective iPSC clones. ATAC-seq libraries were generated using the Omni-ATAC protocol (Corces et al. 2017) with minor modifications."],"repository":["ENA"],"additional_accession":[]},"is_claimable":false,"name":"ATAC-seq of human (Homo sapiens) and cynomolgus macaque (Macaca fascicularis) iPSC and iPSC-derived NPC cell lines","description":"ATAC-seq of human (Homo sapiens) and cynomolgus macaque (Macaca fascicularis) iPSC and iPSC-derived NPC cell lines","dates":{"last_updated":"2023-10-25","first_public":"2023-10-25"},"accession":"PRJEB66457","cross_references":{}}