{"database":"ENA","file_versions":[{"headers":{"Content-Type":["application/json"]},"body":{"files":{"Fastqsanger.gz":["ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/090/ERR13475390/ERR13475390.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/073/ERR13475373/ERR13475373.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/034/ERR13475334/ERR13475334.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/095/ERR13475395/ERR13475395.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/056/ERR13475356/ERR13475356.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/051/ERR13475351/ERR13475351.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/026/ERR13475326/ERR13475326_1.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/042/ERR13475442/ERR13475442.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/008/ERR13475408/ERR13475408.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/032/ERR13475332/ERR13475332_1.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/031/ERR13475331/ERR13475331_2.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/030/ERR13475330/ERR13475330_1.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/060/ERR13475360/ERR13475360.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/012/ERR13475412/ERR13475412.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/078/ERR13475378/ERR13475378.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/026/ERR13475326/ERR13475326.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/034/ERR13475434/ERR13475434.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/048/ERR13475348/ERR13475348.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/087/ERR13475387/ERR13475387.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/042/ERR13475342/ERR13475342.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/081/ERR13475381/ERR13475381.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/086/ERR13475386/ERR13475386.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/020/ERR13475420/ERR13475420.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/064/ERR13475364/ERR13475364.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/094/ERR13475394/ERR13475394.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/035/ERR13475335/ERR13475335.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/028/ERR13475328/ERR13475328_1.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/072/ERR13475372/ERR13475372.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/057/ERR13475357/ERR13475357.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/050/ERR13475350/ERR13475350.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/043/ERR13475343/ERR13475343.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/029/ERR13475329/ERR13475329_2.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/043/ERR13475443/ERR13475443.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/065/ERR13475365/ERR13475365.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/021/ERR13475421/ERR13475421.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/035/ERR13475435/ERR13475435.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/018/ERR13475418/ERR13475418.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/007/ERR13475407/ERR13475407.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/024/ERR13475424/ERR13475424.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/030/ERR13475430/ERR13475430.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/041/ERR13475441/ERR13475441.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/096/ERR13475396/ERR13475396.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/024/ERR13475324/ERR13475324_2.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/024/ERR13475324/ERR13475324_1.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/055/ERR13475355/ERR13475355.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/029/ERR13475329/ERR13475329.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/044/ERR13475344/ERR13475344.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/063/ERR13475363/ERR13475363.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/098/ERR13475398/ERR13475398.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/030/ERR13475330/ERR13475330_2.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/070/ERR13475370/ERR13475370.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/026/ERR13475426/ERR13475426.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/009/ERR13475409/ERR13475409.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/016/ERR13475416/ERR13475416.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/047/ERR13475347/ERR13475347.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/099/ERR13475399/ERR13475399.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/027/ERR13475327/ERR13475327_2.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/033/ERR13475433/ERR13475433.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/038/ERR13475338/ERR13475338.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/025/ERR13475425/ERR13475425.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/040/ERR13475440/ERR13475440.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/061/ERR13475361/ERR13475361.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/054/ERR13475354/ERR13475354.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/017/ERR13475417/ERR13475417.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/032/ERR13475432/ERR13475432.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/045/ERR13475345/ERR13475345.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/062/ERR13475362/ERR13475362.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/067/ERR13475367/ERR13475367.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/084/ERR13475384/ERR13475384.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/028/ERR13475328/ERR13475328_2.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/001/ERR13475401/ERR13475401.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/028/ERR13475328/ERR13475328.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/027/ERR13475327/ERR13475327_1.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/040/ERR13475340/ERR13475340.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/031/ERR13475431/ERR13475431.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/097/ERR13475397/ERR13475397.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/071/ERR13475371/ERR13475371.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/037/ERR13475337/ERR13475337.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/089/ERR13475389/ERR13475389.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/023/ERR13475423/ERR13475423.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/019/ERR13475419/ERR13475419.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/093/ERR13475393/ERR13475393.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/059/ERR13475359/ERR13475359.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/015/ERR13475415/ERR13475415.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/037/ERR13475437/ERR13475437.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/027/ERR13475427/ERR13475427.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/058/ERR13475358/ERR13475358.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/022/ERR13475422/ERR13475422.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/005/ERR13475405/ERR13475405.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/036/ERR13475336/ERR13475336.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/088/ERR13475388/ERR13475388.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/014/ERR13475414/ERR13475414.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/049/ERR13475349/ERR13475349.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/028/ERR13475428/ERR13475428.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/036/ERR13475436/ERR13475436.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/027/ERR13475327/ERR13475327.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/032/ERR13475332/ERR13475332_2.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/031/ERR13475331/ERR13475331_1.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/026/ERR13475326/ERR13475326_2.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/006/ERR13475406/ERR13475406.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/080/ERR13475380/ERR13475380.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/013/ERR13475413/ERR13475413.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/002/ERR13475402/ERR13475402.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/079/ERR13475379/ERR13475379.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/029/ERR13475429/ERR13475429.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/000/ERR13475400/ERR13475400.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/077/ERR13475377/ERR13475377.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/041/ERR13475341/ERR13475341.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/066/ERR13475366/ERR13475366.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/011/ERR13475411/ERR13475411.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/030/ERR13475330/ERR13475330.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/033/ERR13475333/ERR13475333.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/085/ERR13475385/ERR13475385.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/074/ERR13475374/ERR13475374.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/029/ERR13475329/ERR13475329_1.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/031/ERR13475331/ERR13475331.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/010/ERR13475410/ERR13475410.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/004/ERR13475404/ERR13475404.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/038/ERR13475438/ERR13475438.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/092/ERR13475392/ERR13475392.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/075/ERR13475375/ERR13475375.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/025/ERR13475325/ERR13475325.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/039/ERR13475439/ERR13475439.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/003/ERR13475403/ERR13475403.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/069/ERR13475369/ERR13475369.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/068/ERR13475368/ERR13475368.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/032/ERR13475332/ERR13475332.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/091/ERR13475391/ERR13475391.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/076/ERR13475376/ERR13475376.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/ERR134/024/ERR13475324/ERR13475324.fastq.gz"],"Other":["ftp://"]},"type":"primary"},"statusCode":"OK","statusCodeValue":200}],"scores":null,"additional":{"omics_type":["Genomics"],"center_name":["Max Planck Institute for Evolutionary Anthropology"],"full_dataset_link":["https://www.ebi.ac.uk/ena/browser/view/PRJEB78725"],"long_description":["High-coverage genomes of Ranis13 and Zlaty kun obtained through shotgun sequencing. For the remaining specimens from Ranis, we performed SNP enrichment capture using the 1240k array for population genetics analyses, and the capture using the Archaic Admixture array, specifically Panel 4, for investigating Neanderthal and Denisovan ancestry. For libraries from two of the specimens, RNI010 and RNI087, we performed both complete Y-chromosome capture and YMCA capture. In addition to these, we also provide the shallow shotgun sequences produced from each library for screening purpose. All capture and shallow shotgun data presented here were aligned to the human reference genome (hg19, GRCh37), filtered for PCR duplicates, a minimum length of 30 base pairs and minimum mapping quality of 25. Data from the libraries which constructed the high-coverage genomes were filtered for length cutoffs provided by SpAl, and were not filtered for mapping quality."],"tag":["xref:PubMed:39667410"],"repository":["ENA"],"additional_accession":[]},"is_claimable":false,"name":"Genome-wide data from early modern humans from Zlaty kun and Ranis","description":"High-coverage genomes from Ranis13 and Zlaty kun, and sequencing data from several other Ranis specimens (screening data, 1240k captures, Archaic admixture captures and Y-chromosome captures)","dates":{"last_updated":"2025-01-14","first_public":"2024-09-16"},"accession":"PRJEB78725","cross_references":{"PubMed":["39667410"]}}