ENAapplication/xmlftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR283/046/SRR28376646/SRR28376646.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR283/042/SRR28376642/SRR28376642.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR283/045/SRR28376645/SRR28376645.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR283/043/SRR28376643/SRR28376643.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR283/048/SRR28376648/SRR28376648.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR283/044/SRR28376644/SRR28376644.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR283/040/SRR28376640/SRR28376640.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR283/041/SRR28376641/SRR28376641.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR283/049/SRR28376649/SRR28376649.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR283/047/SRR28376647/SRR28376647.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR283/050/SRR28376650/SRR28376650.fastq.gzftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR283/051/SRR28376651/SRR28376651.fastq.gzprimaryOK200GenomicsWeaver, Pharmacology, University of Texas Southwestern Medical Centerhttps://www.ebi.ac.uk/ena/browser/view/PRJNA1089166Caenorhabditis elegansTo investigate how UBR-5 and PABP-2 affect gene expression profile, we generated ubr-5(-) c elegans mutant and performed RNA seq in combination with pabp-2(RNAi). Overall design: We compared gene expression profile of wild type (A), pabp-2(RNAi) (B), ubr-5(-) (C) and ubr-5(-) pabp-2(RNAi) (D). glmLRT.txt: Files with Differential expressed gene list (as indicated in the corresponding sample description field) igenomes.genes_normalized.counts.CPM.tab, normalized counts Grant 3: Welch Foundation I-2022-20190330 Regulation of Non-Canonical Caspase Functions by Distinct Protein Complexesxref:PubMed:39405353ENAfalseAlteration of gene expression in ubr-5(-) and pabp-2(RNAi)Alteration of gene expression in ubr-5(-) and pabp-2(RNAi)2025-09-242024-10-04PRJNA1089166GSE261826623939405353