{"database":"ENA","file_versions":[{"headers":{"Content-Type":["application/json"]},"body":{"files":{"Fastqsanger.gz":["ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR288/029/SRR28818129/SRR28818129.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR288/028/SRR28818128/SRR28818128.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR288/032/SRR28818132/SRR28818132.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR288/030/SRR28818130/SRR28818130.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR288/031/SRR28818131/SRR28818131.fastq.gz","ftp://ftp.sra.ebi.ac.uk/vol1/fastq/SRR288/027/SRR28818127/SRR28818127.fastq.gz"]},"type":"primary"},"statusCode":"OK","statusCodeValue":200}],"scores":null,"additional":{"omics_type":["Genomics"],"center_name":["Ercan, Biology, New York University"],"full_dataset_link":["https://www.ebi.ac.uk/ena/browser/view/PRJNA1105103"],"scientific_name":["Caenorhabditis elegans"],"long_description":["In embryos, DCC binding across the length of the ~17.7 Mb X chromosome initiates at a set of recruitment elements on the X (rex). Individual rex sites collectively contribute to recruitment and repression, thus deletion of one or few rex sites causes subtle changes, as measured by mRNA-seq in mixed-stage embryos. We previously constructed a strain deleting rex-1, located ~6 kb downstream of dpy-23 (https://doi.org/10.7554/eLife.23645). Here we performed mRNA-seq in rex-1 deletion embryos. Overall design: mRNA-seq in controls and rex-1 deletion embryos."],"repository":["ENA"],"name_synonyms":["Zfp-42, mRNA-seq, determination, Rex1, REX-1, chemical analysis, assay, Zinc finger protein 754, mREX-1, Rex-1, DEL., hREX-1, Reduced expression protein 1"],"description_synonyms":["Zfp-42, mRNA-seq, determination, Rex1, REX-1, chemical analysis, assay, Zinc finger protein 754, mREX-1, Rex-1, DEL., hREX-1, Reduced expression protein 1"],"additional_accession":[]},"is_claimable":false,"name":"mRNA-seq analysis of rex-1 deletion in C. elegans","description":"mRNA-seq analysis of rex-1 deletion in C. elegans","dates":{"last_updated":"2025-09-24","first_public":"2024-05-07"},"accession":"PRJNA1105103","cross_references":{"GEO":["GSE265989"],"taxon":["6239"]}}